Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
CSMD1Q96PZ7 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CSMD1Q96PZ7 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CSMD1Q96PZ7 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CSMD1Q96PZ7 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
CSMD1Q96PZ7 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
CSMD1Q96PZ7 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CSMD1Q96PZ7 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CSMD1Q96PZ7 EED-207ENST00000528180 1745 ntTSL 5 BASIC17.92■□□□□ 0.46
CSMD1Q96PZ7 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CSMD1Q96PZ7 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CSMD1Q96PZ7 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.92■□□□□ 0.46
CSMD1Q96PZ7 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CSMD1Q96PZ7 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.92■□□□□ 0.46
CSMD1Q96PZ7 AC092368.3-202ENST00000574180 1591 ntBASIC17.92■□□□□ 0.46
CSMD1Q96PZ7 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CSMD1Q96PZ7 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CSMD1Q96PZ7 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CSMD1Q96PZ7 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CSMD1Q96PZ7 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.92■□□□□ 0.46
CSMD1Q96PZ7 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
CSMD1Q96PZ7 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.92■□□□□ 0.46
CSMD1Q96PZ7 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.92■□□□□ 0.46
CSMD1Q96PZ7 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CSMD1Q96PZ7 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CSMD1Q96PZ7 AC142381.3-201ENST00000568208 1670 ntBASIC17.92■□□□□ 0.46
CSMD1Q96PZ7 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CSMD1Q96PZ7 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CSMD1Q96PZ7 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CSMD1Q96PZ7 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CSMD1Q96PZ7 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
CSMD1Q96PZ7 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CSMD1Q96PZ7 KRT17P3-201ENST00000420566 1262 ntBASIC17.91■□□□□ 0.46
CSMD1Q96PZ7 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CSMD1Q96PZ7 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.91■□□□□ 0.46
CSMD1Q96PZ7 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.91■□□□□ 0.46
CSMD1Q96PZ7 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC17.91■□□□□ 0.46
CSMD1Q96PZ7 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CSMD1Q96PZ7 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CSMD1Q96PZ7 RBM17P2-201ENST00000616397 1405 ntBASIC17.91■□□□□ 0.46
CSMD1Q96PZ7 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CSMD1Q96PZ7 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.91■□□□□ 0.46
CSMD1Q96PZ7 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CSMD1Q96PZ7 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CSMD1Q96PZ7 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CSMD1Q96PZ7 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CSMD1Q96PZ7 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CSMD1Q96PZ7 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.91■□□□□ 0.46
CSMD1Q96PZ7 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.91■□□□□ 0.46
CSMD1Q96PZ7 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CSMD1Q96PZ7 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC17.91■□□□□ 0.46
CSMD1Q96PZ7 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CSMD1Q96PZ7 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC17.91■□□□□ 0.46
CSMD1Q96PZ7 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.9■□□□□ 0.46
CSMD1Q96PZ7 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CSMD1Q96PZ7 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.9■□□□□ 0.46
CSMD1Q96PZ7 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSMD1Q96PZ7 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.9■□□□□ 0.46
CSMD1Q96PZ7 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CSMD1Q96PZ7 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CSMD1Q96PZ7 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSMD1Q96PZ7 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CSMD1Q96PZ7 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CSMD1Q96PZ7 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.9■□□□□ 0.46
CSMD1Q96PZ7 AC113347.1-201ENST00000413321 391 ntBASIC17.9■□□□□ 0.46
CSMD1Q96PZ7 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.9■□□□□ 0.46
CSMD1Q96PZ7 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSMD1Q96PZ7 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CSMD1Q96PZ7 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSMD1Q96PZ7 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSMD1Q96PZ7 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC17.9■□□□□ 0.46
CSMD1Q96PZ7 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CSMD1Q96PZ7 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CSMD1Q96PZ7 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CSMD1Q96PZ7 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.89■□□□□ 0.45
CSMD1Q96PZ7 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CSMD1Q96PZ7 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CSMD1Q96PZ7 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CSMD1Q96PZ7 KRT18P57-201ENST00000443599 1254 ntBASIC17.89■□□□□ 0.45
CSMD1Q96PZ7 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.89■□□□□ 0.45
CSMD1Q96PZ7 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CSMD1Q96PZ7 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.89■□□□□ 0.45
CSMD1Q96PZ7 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
CSMD1Q96PZ7 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CSMD1Q96PZ7 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CSMD1Q96PZ7 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.89■□□□□ 0.45
CSMD1Q96PZ7 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.89■□□□□ 0.45
CSMD1Q96PZ7 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CSMD1Q96PZ7 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.89■□□□□ 0.45
CSMD1Q96PZ7 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CSMD1Q96PZ7 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CSMD1Q96PZ7 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CSMD1Q96PZ7 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CSMD1Q96PZ7 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CSMD1Q96PZ7 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CSMD1Q96PZ7 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CSMD1Q96PZ7 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC17.88■□□□□ 0.45
CSMD1Q96PZ7 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CSMD1Q96PZ7 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CSMD1Q96PZ7 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms