Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC23.83■■□□□ 1.4
SYNGAP1Q96PV0 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC23.83■■□□□ 1.4
SYNGAP1Q96PV0 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SYNGAP1Q96PV0 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
SYNGAP1Q96PV0 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SYNGAP1Q96PV0 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SYNGAP1Q96PV0 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SYNGAP1Q96PV0 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SYNGAP1Q96PV0 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC23.82■■□□□ 1.4
SYNGAP1Q96PV0 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC23.82■■□□□ 1.4
SYNGAP1Q96PV0 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC23.82■■□□□ 1.4
SYNGAP1Q96PV0 GAS7-202ENST00000396115 929 ntTSL 5 BASIC23.82■■□□□ 1.4
SYNGAP1Q96PV0 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC23.82■■□□□ 1.4
SYNGAP1Q96PV0 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC23.82■■□□□ 1.4
SYNGAP1Q96PV0 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC23.82■■□□□ 1.4
SYNGAP1Q96PV0 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SYNGAP1Q96PV0 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SYNGAP1Q96PV0 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC23.81■■□□□ 1.4
SYNGAP1Q96PV0 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
SYNGAP1Q96PV0 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SYNGAP1Q96PV0 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC23.81■■□□□ 1.4
SYNGAP1Q96PV0 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC23.81■■□□□ 1.4
SYNGAP1Q96PV0 AC098590.1-201ENST00000468126 897 ntBASIC23.81■■□□□ 1.4
SYNGAP1Q96PV0 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC23.81■■□□□ 1.4
SYNGAP1Q96PV0 IRX5-204ENST00000560154 879 ntTSL 5 BASIC23.81■■□□□ 1.4
SYNGAP1Q96PV0 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
SYNGAP1Q96PV0 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SYNGAP1Q96PV0 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SYNGAP1Q96PV0 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
SYNGAP1Q96PV0 AC233723.2-201ENST00000623798 2106 ntBASIC23.8■■□□□ 1.4
SYNGAP1Q96PV0 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
SYNGAP1Q96PV0 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SYNGAP1Q96PV0 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SYNGAP1Q96PV0 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SYNGAP1Q96PV0 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SYNGAP1Q96PV0 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SYNGAP1Q96PV0 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC23.8■■□□□ 1.4
SYNGAP1Q96PV0 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC23.8■■□□□ 1.4
SYNGAP1Q96PV0 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC23.8■■□□□ 1.4
SYNGAP1Q96PV0 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC23.8■■□□□ 1.4
SYNGAP1Q96PV0 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
SYNGAP1Q96PV0 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC23.79■■□□□ 1.4
SYNGAP1Q96PV0 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SYNGAP1Q96PV0 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SYNGAP1Q96PV0 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
SYNGAP1Q96PV0 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC23.79■■□□□ 1.4
SYNGAP1Q96PV0 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
SYNGAP1Q96PV0 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC23.79■■□□□ 1.4
SYNGAP1Q96PV0 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SYNGAP1Q96PV0 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
SYNGAP1Q96PV0 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SYNGAP1Q96PV0 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
SYNGAP1Q96PV0 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC23.79■■□□□ 1.4
SYNGAP1Q96PV0 INO80E-214ENST00000620599 515 ntTSL 2 BASIC23.79■■□□□ 1.4
SYNGAP1Q96PV0 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SYNGAP1Q96PV0 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC23.78■■□□□ 1.4
SYNGAP1Q96PV0 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SYNGAP1Q96PV0 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SYNGAP1Q96PV0 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SYNGAP1Q96PV0 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SYNGAP1Q96PV0 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
SYNGAP1Q96PV0 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SYNGAP1Q96PV0 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SYNGAP1Q96PV0 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SYNGAP1Q96PV0 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
SYNGAP1Q96PV0 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC23.78■■□□□ 1.4
SYNGAP1Q96PV0 SERPINH1P1-201ENST00000419794 1249 ntBASIC23.78■■□□□ 1.4
SYNGAP1Q96PV0 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
SYNGAP1Q96PV0 RPS2P52-201ENST00000469610 820 ntBASIC23.78■■□□□ 1.4
SYNGAP1Q96PV0 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC23.78■■□□□ 1.4
SYNGAP1Q96PV0 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC23.78■■□□□ 1.4
SYNGAP1Q96PV0 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
SYNGAP1Q96PV0 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC23.78■■□□□ 1.4
SYNGAP1Q96PV0 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC23.78■■□□□ 1.4
SYNGAP1Q96PV0 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SYNGAP1Q96PV0 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
SYNGAP1Q96PV0 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SYNGAP1Q96PV0 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC23.77■■□□□ 1.4
SYNGAP1Q96PV0 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC23.77■■□□□ 1.4
SYNGAP1Q96PV0 AC026471.6-201ENST00000622954 1905 ntBASIC23.77■■□□□ 1.4
SYNGAP1Q96PV0 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SYNGAP1Q96PV0 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SYNGAP1Q96PV0 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
SYNGAP1Q96PV0 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC23.77■■□□□ 1.4
SYNGAP1Q96PV0 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SYNGAP1Q96PV0 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SYNGAP1Q96PV0 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC23.77■■□□□ 1.4
SYNGAP1Q96PV0 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
SYNGAP1Q96PV0 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SYNGAP1Q96PV0 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
SYNGAP1Q96PV0 GCSHP5-201ENST00000443090 522 ntBASIC23.77■■□□□ 1.4
SYNGAP1Q96PV0 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
SYNGAP1Q96PV0 MMAB-206ENST00000540016 945 ntTSL 3 BASIC23.77■■□□□ 1.4
SYNGAP1Q96PV0 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC23.77■■□□□ 1.4
SYNGAP1Q96PV0 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SYNGAP1Q96PV0 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SYNGAP1Q96PV0 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SYNGAP1Q96PV0 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SYNGAP1Q96PV0 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.39
SYNGAP1Q96PV0 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms