Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
DUX3Q96PT4 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
DUX3Q96PT4 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC16.23■□□□□ 0.19
DUX3Q96PT4 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
DUX3Q96PT4 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.23■□□□□ 0.19
DUX3Q96PT4 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
DUX3Q96PT4 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC16.23■□□□□ 0.19
DUX3Q96PT4 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC16.23■□□□□ 0.19
DUX3Q96PT4 AL121832.2-201ENST00000610979 668 ntBASIC16.23■□□□□ 0.19
DUX3Q96PT4 AC120498.10-201ENST00000621827 505 ntBASIC16.23■□□□□ 0.19
DUX3Q96PT4 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC16.23■□□□□ 0.19
DUX3Q96PT4 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
DUX3Q96PT4 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
DUX3Q96PT4 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
DUX3Q96PT4 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
DUX3Q96PT4 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC16.23■□□□□ 0.19
DUX3Q96PT4 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC16.23■□□□□ 0.19
DUX3Q96PT4 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC16.22■□□□□ 0.19
DUX3Q96PT4 ME2-206ENST00000638410 2289 ntTSL 5 BASIC16.22■□□□□ 0.19
DUX3Q96PT4 ME2-210ENST00000639255 2262 ntTSL 5 BASIC16.22■□□□□ 0.19
DUX3Q96PT4 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
DUX3Q96PT4 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DUX3Q96PT4 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DUX3Q96PT4 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC16.22■□□□□ 0.19
DUX3Q96PT4 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC16.22■□□□□ 0.19
DUX3Q96PT4 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.22■□□□□ 0.19
DUX3Q96PT4 TERF1P5-201ENST00000477545 1207 ntBASIC16.22■□□□□ 0.19
DUX3Q96PT4 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC16.22■□□□□ 0.19
DUX3Q96PT4 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
DUX3Q96PT4 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC16.22■□□□□ 0.19
DUX3Q96PT4 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
DUX3Q96PT4 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
DUX3Q96PT4 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
DUX3Q96PT4 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DUX3Q96PT4 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DUX3Q96PT4 GUSBP5-202ENST00000510805 1989 ntBASIC16.22■□□□□ 0.19
DUX3Q96PT4 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC16.22■□□□□ 0.19
DUX3Q96PT4 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
DUX3Q96PT4 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
DUX3Q96PT4 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
DUX3Q96PT4 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
DUX3Q96PT4 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
DUX3Q96PT4 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
DUX3Q96PT4 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
DUX3Q96PT4 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
DUX3Q96PT4 EMC9-206ENST00000560403 872 ntTSL 2 BASIC16.21■□□□□ 0.19
DUX3Q96PT4 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
DUX3Q96PT4 PARP1-210ENST00000629232 477 ntTSL 5 BASIC16.21■□□□□ 0.19
DUX3Q96PT4 GAMT-205ENST00000640762 751 ntTSL 5 BASIC16.21■□□□□ 0.19
DUX3Q96PT4 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC16.21■□□□□ 0.19
DUX3Q96PT4 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
DUX3Q96PT4 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
DUX3Q96PT4 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
DUX3Q96PT4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC16.21■□□□□ 0.18
DUX3Q96PT4 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
DUX3Q96PT4 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
DUX3Q96PT4 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC16.2■□□□□ 0.18
DUX3Q96PT4 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
DUX3Q96PT4 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
DUX3Q96PT4 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
DUX3Q96PT4 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC16.2■□□□□ 0.18
DUX3Q96PT4 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DUX3Q96PT4 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.2■□□□□ 0.18
DUX3Q96PT4 METTL15-202ENST00000403099 795 ntTSL 5 BASIC16.2■□□□□ 0.18
DUX3Q96PT4 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC16.2■□□□□ 0.18
DUX3Q96PT4 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC16.2■□□□□ 0.18
DUX3Q96PT4 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC16.2■□□□□ 0.18
DUX3Q96PT4 AC105036.2-201ENST00000569468 176 ntBASIC16.2■□□□□ 0.18
DUX3Q96PT4 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC16.2■□□□□ 0.18
DUX3Q96PT4 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16.2■□□□□ 0.18
DUX3Q96PT4 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
DUX3Q96PT4 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DUX3Q96PT4 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DUX3Q96PT4 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DUX3Q96PT4 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DUX3Q96PT4 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
DUX3Q96PT4 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC16.19■□□□□ 0.18
DUX3Q96PT4 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC16.19■□□□□ 0.18
DUX3Q96PT4 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
DUX3Q96PT4 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DUX3Q96PT4 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
DUX3Q96PT4 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC16.19■□□□□ 0.18
DUX3Q96PT4 APTR-203ENST00000430801 583 ntTSL 5 BASIC16.19■□□□□ 0.18
DUX3Q96PT4 APTR-205ENST00000447009 902 ntTSL 2 BASIC16.19■□□□□ 0.18
DUX3Q96PT4 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
DUX3Q96PT4 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC16.19■□□□□ 0.18
DUX3Q96PT4 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC16.19■□□□□ 0.18
DUX3Q96PT4 AL138781.1-201ENST00000566567 1274 ntBASIC16.19■□□□□ 0.18
DUX3Q96PT4 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC16.19■□□□□ 0.18
DUX3Q96PT4 AC013268.1-206ENST00000638368 961 ntBASIC16.19■□□□□ 0.18
DUX3Q96PT4 AC112229.1-201ENST00000639295 961 ntBASIC16.19■□□□□ 0.18
DUX3Q96PT4 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DUX3Q96PT4 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC16.19■□□□□ 0.18
DUX3Q96PT4 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
DUX3Q96PT4 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC16.19■□□□□ 0.18
DUX3Q96PT4 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
DUX3Q96PT4 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
DUX3Q96PT4 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
DUX3Q96PT4 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
DUX3Q96PT4 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms