Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.03■□□□□ 0.8
CNTNAP3BQ96NU0 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.03■□□□□ 0.8
CNTNAP3BQ96NU0 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNTNAP3BQ96NU0 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNTNAP3BQ96NU0 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CNTNAP3BQ96NU0 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNTNAP3BQ96NU0 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.03■□□□□ 0.8
CNTNAP3BQ96NU0 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CNTNAP3BQ96NU0 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.03■□□□□ 0.8
CNTNAP3BQ96NU0 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.03■□□□□ 0.8
CNTNAP3BQ96NU0 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.03■□□□□ 0.8
CNTNAP3BQ96NU0 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
CNTNAP3BQ96NU0 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.03■□□□□ 0.8
CNTNAP3BQ96NU0 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.03■□□□□ 0.8
CNTNAP3BQ96NU0 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.03■□□□□ 0.8
CNTNAP3BQ96NU0 AC079834.2-201ENST00000609776 1949 ntBASIC20.03■□□□□ 0.8
CNTNAP3BQ96NU0 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNTNAP3BQ96NU0 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNTNAP3BQ96NU0 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNTNAP3BQ96NU0 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNTNAP3BQ96NU0 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CNTNAP3BQ96NU0 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.02■□□□□ 0.8
CNTNAP3BQ96NU0 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNTNAP3BQ96NU0 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNTNAP3BQ96NU0 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNTNAP3BQ96NU0 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNTNAP3BQ96NU0 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.02■□□□□ 0.8
CNTNAP3BQ96NU0 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.02■□□□□ 0.8
CNTNAP3BQ96NU0 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.02■□□□□ 0.8
CNTNAP3BQ96NU0 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.02■□□□□ 0.8
CNTNAP3BQ96NU0 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.02■□□□□ 0.8
CNTNAP3BQ96NU0 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNTNAP3BQ96NU0 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNTNAP3BQ96NU0 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CNTNAP3BQ96NU0 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CNTNAP3BQ96NU0 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.02■□□□□ 0.79
CNTNAP3BQ96NU0 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CNTNAP3BQ96NU0 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNTNAP3BQ96NU0 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.01■□□□□ 0.79
CNTNAP3BQ96NU0 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.01■□□□□ 0.79
CNTNAP3BQ96NU0 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.01■□□□□ 0.79
CNTNAP3BQ96NU0 DUX4L26-201ENST00000489078 1255 ntBASIC20.01■□□□□ 0.79
CNTNAP3BQ96NU0 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.01■□□□□ 0.79
CNTNAP3BQ96NU0 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
CNTNAP3BQ96NU0 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNTNAP3BQ96NU0 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNTNAP3BQ96NU0 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
CNTNAP3BQ96NU0 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNTNAP3BQ96NU0 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CNTNAP3BQ96NU0 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
CNTNAP3BQ96NU0 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CNTNAP3BQ96NU0 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20■□□□□ 0.79
CNTNAP3BQ96NU0 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20■□□□□ 0.79
CNTNAP3BQ96NU0 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20■□□□□ 0.79
CNTNAP3BQ96NU0 POM121L13P-201ENST00000422362 380 ntBASIC20■□□□□ 0.79
CNTNAP3BQ96NU0 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20■□□□□ 0.79
CNTNAP3BQ96NU0 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
CNTNAP3BQ96NU0 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CNTNAP3BQ96NU0 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20■□□□□ 0.79
CNTNAP3BQ96NU0 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20■□□□□ 0.79
CNTNAP3BQ96NU0 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CNTNAP3BQ96NU0 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CNTNAP3BQ96NU0 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CNTNAP3BQ96NU0 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20■□□□□ 0.79
CNTNAP3BQ96NU0 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CNTNAP3BQ96NU0 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.99■□□□□ 0.79
CNTNAP3BQ96NU0 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNTNAP3BQ96NU0 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CNTNAP3BQ96NU0 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CNTNAP3BQ96NU0 AC113347.1-201ENST00000413321 391 ntBASIC19.99■□□□□ 0.79
CNTNAP3BQ96NU0 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.99■□□□□ 0.79
CNTNAP3BQ96NU0 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.99■□□□□ 0.79
CNTNAP3BQ96NU0 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.99■□□□□ 0.79
CNTNAP3BQ96NU0 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
CNTNAP3BQ96NU0 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.99■□□□□ 0.79
CNTNAP3BQ96NU0 AC124016.1-201ENST00000609552 612 ntBASIC19.99■□□□□ 0.79
CNTNAP3BQ96NU0 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.99■□□□□ 0.79
CNTNAP3BQ96NU0 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNTNAP3BQ96NU0 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CNTNAP3BQ96NU0 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.99■□□□□ 0.79
CNTNAP3BQ96NU0 AC010501.1-201ENST00000606270 1962 ntBASIC19.99■□□□□ 0.79
CNTNAP3BQ96NU0 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
CNTNAP3BQ96NU0 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNTNAP3BQ96NU0 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CNTNAP3BQ96NU0 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNTNAP3BQ96NU0 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNTNAP3BQ96NU0 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CNTNAP3BQ96NU0 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNTNAP3BQ96NU0 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CNTNAP3BQ96NU0 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNTNAP3BQ96NU0 AL355472.2-201ENST00000422958 438 ntBASIC19.98■□□□□ 0.79
CNTNAP3BQ96NU0 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CNTNAP3BQ96NU0 KRT18P48-201ENST00000434763 852 ntBASIC19.98■□□□□ 0.79
CNTNAP3BQ96NU0 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.98■□□□□ 0.79
CNTNAP3BQ96NU0 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.98■□□□□ 0.79
CNTNAP3BQ96NU0 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CNTNAP3BQ96NU0 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CNTNAP3BQ96NU0 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.98■□□□□ 0.79
CNTNAP3BQ96NU0 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.98■□□□□ 0.79
CNTNAP3BQ96NU0 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms