Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
IFT43Q96FT9 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.47■■□□□ 1.03
IFT43Q96FT9 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.47■■□□□ 1.03
IFT43Q96FT9 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
IFT43Q96FT9 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
IFT43Q96FT9 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.47■■□□□ 1.03
IFT43Q96FT9 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
IFT43Q96FT9 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
IFT43Q96FT9 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.47■■□□□ 1.03
IFT43Q96FT9 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.47■■□□□ 1.03
IFT43Q96FT9 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.47■■□□□ 1.03
IFT43Q96FT9 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.47■■□□□ 1.03
IFT43Q96FT9 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
IFT43Q96FT9 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
IFT43Q96FT9 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
IFT43Q96FT9 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
IFT43Q96FT9 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.46■■□□□ 1.03
IFT43Q96FT9 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.46■■□□□ 1.03
IFT43Q96FT9 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.46■■□□□ 1.03
IFT43Q96FT9 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.46■■□□□ 1.03
IFT43Q96FT9 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.46■■□□□ 1.03
IFT43Q96FT9 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
IFT43Q96FT9 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
IFT43Q96FT9 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
IFT43Q96FT9 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
IFT43Q96FT9 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
IFT43Q96FT9 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
IFT43Q96FT9 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
IFT43Q96FT9 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.46■■□□□ 1.03
IFT43Q96FT9 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.46■■□□□ 1.03
IFT43Q96FT9 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
IFT43Q96FT9 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
IFT43Q96FT9 AP004607.4-201ENST00000530158 1459 ntBASIC21.45■■□□□ 1.03
IFT43Q96FT9 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
IFT43Q96FT9 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
IFT43Q96FT9 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
IFT43Q96FT9 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.45■■□□□ 1.02
IFT43Q96FT9 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
IFT43Q96FT9 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
IFT43Q96FT9 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
IFT43Q96FT9 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
IFT43Q96FT9 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
IFT43Q96FT9 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
IFT43Q96FT9 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.45■■□□□ 1.02
IFT43Q96FT9 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.45■■□□□ 1.02
IFT43Q96FT9 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.45■■□□□ 1.02
IFT43Q96FT9 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.45■■□□□ 1.02
IFT43Q96FT9 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
IFT43Q96FT9 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
IFT43Q96FT9 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.45■■□□□ 1.02
IFT43Q96FT9 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.45■■□□□ 1.02
IFT43Q96FT9 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.45■■□□□ 1.02
IFT43Q96FT9 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.45■■□□□ 1.02
IFT43Q96FT9 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.44■■□□□ 1.02
IFT43Q96FT9 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
IFT43Q96FT9 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
IFT43Q96FT9 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
IFT43Q96FT9 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.44■■□□□ 1.02
IFT43Q96FT9 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.44■■□□□ 1.02
IFT43Q96FT9 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
IFT43Q96FT9 KRT19P1-201ENST00000405746 1186 ntBASIC21.44■■□□□ 1.02
IFT43Q96FT9 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.44■■□□□ 1.02
IFT43Q96FT9 KRT18P61-201ENST00000585825 1298 ntBASIC21.44■■□□□ 1.02
IFT43Q96FT9 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
IFT43Q96FT9 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
IFT43Q96FT9 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.43■■□□□ 1.02
IFT43Q96FT9 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
IFT43Q96FT9 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
IFT43Q96FT9 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
IFT43Q96FT9 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.43■■□□□ 1.02
IFT43Q96FT9 AC016769.1-201ENST00000409132 1010 ntBASIC21.43■■□□□ 1.02
IFT43Q96FT9 AC079140.4-201ENST00000507448 529 ntBASIC21.43■■□□□ 1.02
IFT43Q96FT9 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.43■■□□□ 1.02
IFT43Q96FT9 AC137761.2-201ENST00000561729 223 ntBASIC21.43■■□□□ 1.02
IFT43Q96FT9 AC145350.3-201ENST00000569033 163 ntBASIC21.43■■□□□ 1.02
IFT43Q96FT9 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.43■■□□□ 1.02
IFT43Q96FT9 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
IFT43Q96FT9 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
IFT43Q96FT9 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.43■■□□□ 1.02
IFT43Q96FT9 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
IFT43Q96FT9 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.43■■□□□ 1.02
IFT43Q96FT9 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.42■■□□□ 1.02
IFT43Q96FT9 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
IFT43Q96FT9 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
IFT43Q96FT9 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
IFT43Q96FT9 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
IFT43Q96FT9 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.42■■□□□ 1.02
IFT43Q96FT9 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.42■■□□□ 1.02
IFT43Q96FT9 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.42■■□□□ 1.02
IFT43Q96FT9 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.42■■□□□ 1.02
IFT43Q96FT9 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.42■■□□□ 1.02
IFT43Q96FT9 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
IFT43Q96FT9 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
IFT43Q96FT9 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
IFT43Q96FT9 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
IFT43Q96FT9 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
IFT43Q96FT9 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.41■■□□□ 1.02
IFT43Q96FT9 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
IFT43Q96FT9 ID1-201ENST00000376105 1233 ntBASIC21.41■■□□□ 1.02
IFT43Q96FT9 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 209.1 ms