Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.66■□□□□ 0.74
SLC47A1Q96FL8 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC47A1Q96FL8 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.66■□□□□ 0.74
SLC47A1Q96FL8 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SLC47A1Q96FL8 AC131212.1-201ENST00000613771 668 ntBASIC19.66■□□□□ 0.74
SLC47A1Q96FL8 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.66■□□□□ 0.74
SLC47A1Q96FL8 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC47A1Q96FL8 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SLC47A1Q96FL8 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC47A1Q96FL8 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC47A1Q96FL8 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.65■□□□□ 0.74
SLC47A1Q96FL8 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC47A1Q96FL8 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
SLC47A1Q96FL8 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC47A1Q96FL8 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC47A1Q96FL8 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.65■□□□□ 0.74
SLC47A1Q96FL8 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SLC47A1Q96FL8 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC47A1Q96FL8 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC47A1Q96FL8 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC47A1Q96FL8 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC47A1Q96FL8 AP005435.1-201ENST00000529293 1178 ntBASIC19.65■□□□□ 0.74
SLC47A1Q96FL8 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.65■□□□□ 0.74
SLC47A1Q96FL8 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
SLC47A1Q96FL8 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC47A1Q96FL8 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC47A1Q96FL8 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC47A1Q96FL8 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC47A1Q96FL8 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
SLC47A1Q96FL8 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC47A1Q96FL8 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC47A1Q96FL8 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC47A1Q96FL8 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC47A1Q96FL8 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SLC47A1Q96FL8 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC47A1Q96FL8 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.64■□□□□ 0.74
SLC47A1Q96FL8 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SLC47A1Q96FL8 SLC47A1P1-202ENST00000449666 945 ntBASIC19.64■□□□□ 0.73
SLC47A1Q96FL8 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC47A1Q96FL8 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.64■□□□□ 0.73
SLC47A1Q96FL8 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SLC47A1Q96FL8 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SLC47A1Q96FL8 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.64■□□□□ 0.73
SLC47A1Q96FL8 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SLC47A1Q96FL8 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SLC47A1Q96FL8 PLK5-205ENST00000642079 1969 ntBASIC19.64■□□□□ 0.73
SLC47A1Q96FL8 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
SLC47A1Q96FL8 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SLC47A1Q96FL8 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.63■□□□□ 0.73
SLC47A1Q96FL8 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.63■□□□□ 0.73
SLC47A1Q96FL8 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.63■□□□□ 0.73
SLC47A1Q96FL8 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC47A1Q96FL8 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
SLC47A1Q96FL8 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC47A1Q96FL8 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SLC47A1Q96FL8 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SLC47A1Q96FL8 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SLC47A1Q96FL8 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.63■□□□□ 0.73
SLC47A1Q96FL8 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.63■□□□□ 0.73
SLC47A1Q96FL8 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SLC47A1Q96FL8 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.63■□□□□ 0.73
SLC47A1Q96FL8 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.63■□□□□ 0.73
SLC47A1Q96FL8 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC47A1Q96FL8 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC47A1Q96FL8 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SLC47A1Q96FL8 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SLC47A1Q96FL8 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC47A1Q96FL8 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC47A1Q96FL8 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SLC47A1Q96FL8 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC47A1Q96FL8 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC47A1Q96FL8 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC47A1Q96FL8 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC47A1Q96FL8 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC47A1Q96FL8 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC47A1Q96FL8 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.62■□□□□ 0.73
SLC47A1Q96FL8 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SLC47A1Q96FL8 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.62■□□□□ 0.73
SLC47A1Q96FL8 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC47A1Q96FL8 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC47A1Q96FL8 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.62■□□□□ 0.73
SLC47A1Q96FL8 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SLC47A1Q96FL8 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
SLC47A1Q96FL8 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC47A1Q96FL8 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC47A1Q96FL8 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.62■□□□□ 0.73
SLC47A1Q96FL8 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SLC47A1Q96FL8 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
SLC47A1Q96FL8 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC47A1Q96FL8 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC47A1Q96FL8 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC47A1Q96FL8 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SLC47A1Q96FL8 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SLC47A1Q96FL8 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
SLC47A1Q96FL8 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.62■□□□□ 0.73
SLC47A1Q96FL8 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.61■□□□□ 0.73
SLC47A1Q96FL8 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
SLC47A1Q96FL8 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SLC47A1Q96FL8 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SLC47A1Q96FL8 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms