Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CDCA5Q96FF9 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
CDCA5Q96FF9 AC003102.1-202ENST00000563394 1796 ntBASIC24.72■■□□□ 1.55
CDCA5Q96FF9 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC24.72■■□□□ 1.55
CDCA5Q96FF9 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CDCA5Q96FF9 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC24.72■■□□□ 1.55
CDCA5Q96FF9 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CDCA5Q96FF9 ISG20-202ENST00000379224 540 ntTSL 3 BASIC24.72■■□□□ 1.55
CDCA5Q96FF9 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CDCA5Q96FF9 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC24.72■■□□□ 1.55
CDCA5Q96FF9 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC24.72■■□□□ 1.55
CDCA5Q96FF9 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC24.72■■□□□ 1.55
CDCA5Q96FF9 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CDCA5Q96FF9 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
CDCA5Q96FF9 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC24.72■■□□□ 1.55
CDCA5Q96FF9 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CDCA5Q96FF9 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC24.71■■□□□ 1.55
CDCA5Q96FF9 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
CDCA5Q96FF9 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC24.71■■□□□ 1.55
CDCA5Q96FF9 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CDCA5Q96FF9 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC24.71■■□□□ 1.55
CDCA5Q96FF9 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
CDCA5Q96FF9 CRK-204ENST00000574295 1391 ntTSL 5 BASIC24.71■■□□□ 1.55
CDCA5Q96FF9 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC24.71■■□□□ 1.55
CDCA5Q96FF9 RPS2P55-201ENST00000397318 883 ntBASIC24.71■■□□□ 1.55
CDCA5Q96FF9 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CDCA5Q96FF9 AC107956.1-201ENST00000494359 873 ntBASIC24.71■■□□□ 1.55
CDCA5Q96FF9 KLF2-202ENST00000592003 564 ntTSL 3 BASIC24.71■■□□□ 1.55
CDCA5Q96FF9 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC24.71■■□□□ 1.55
CDCA5Q96FF9 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC24.71■■□□□ 1.55
CDCA5Q96FF9 AC139530.1-201ENST00000575312 1977 ntBASIC24.71■■□□□ 1.55
CDCA5Q96FF9 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
CDCA5Q96FF9 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC24.7■■□□□ 1.55
CDCA5Q96FF9 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
CDCA5Q96FF9 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CDCA5Q96FF9 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
CDCA5Q96FF9 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
CDCA5Q96FF9 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CDCA5Q96FF9 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC24.7■■□□□ 1.54
CDCA5Q96FF9 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC24.7■■□□□ 1.54
CDCA5Q96FF9 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.54
CDCA5Q96FF9 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
CDCA5Q96FF9 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CDCA5Q96FF9 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC24.7■■□□□ 1.54
CDCA5Q96FF9 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC24.7■■□□□ 1.54
CDCA5Q96FF9 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CDCA5Q96FF9 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CDCA5Q96FF9 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
CDCA5Q96FF9 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CDCA5Q96FF9 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
CDCA5Q96FF9 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CDCA5Q96FF9 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
CDCA5Q96FF9 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CDCA5Q96FF9 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
CDCA5Q96FF9 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CDCA5Q96FF9 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CDCA5Q96FF9 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
CDCA5Q96FF9 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
CDCA5Q96FF9 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC24.69■■□□□ 1.54
CDCA5Q96FF9 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CDCA5Q96FF9 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CDCA5Q96FF9 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC24.69■■□□□ 1.54
CDCA5Q96FF9 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
CDCA5Q96FF9 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CDCA5Q96FF9 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CDCA5Q96FF9 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
CDCA5Q96FF9 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC24.68■■□□□ 1.54
CDCA5Q96FF9 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
CDCA5Q96FF9 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CDCA5Q96FF9 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CDCA5Q96FF9 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
CDCA5Q96FF9 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CDCA5Q96FF9 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
CDCA5Q96FF9 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC24.68■■□□□ 1.54
CDCA5Q96FF9 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC24.68■■□□□ 1.54
CDCA5Q96FF9 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC24.68■■□□□ 1.54
CDCA5Q96FF9 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CDCA5Q96FF9 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CDCA5Q96FF9 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CDCA5Q96FF9 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC24.67■■□□□ 1.54
CDCA5Q96FF9 KRT17P2-201ENST00000300992 1314 ntBASIC24.67■■□□□ 1.54
CDCA5Q96FF9 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC24.67■■□□□ 1.54
CDCA5Q96FF9 NXN-202ENST00000537628 1340 ntTSL 3 BASIC24.67■■□□□ 1.54
CDCA5Q96FF9 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC24.67■■□□□ 1.54
CDCA5Q96FF9 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CDCA5Q96FF9 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
CDCA5Q96FF9 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CDCA5Q96FF9 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CDCA5Q96FF9 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC24.67■■□□□ 1.54
CDCA5Q96FF9 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CDCA5Q96FF9 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC24.67■■□□□ 1.54
CDCA5Q96FF9 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CDCA5Q96FF9 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC24.66■■□□□ 1.54
CDCA5Q96FF9 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC24.66■■□□□ 1.54
CDCA5Q96FF9 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
CDCA5Q96FF9 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
CDCA5Q96FF9 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC24.66■■□□□ 1.54
CDCA5Q96FF9 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC24.66■■□□□ 1.54
CDCA5Q96FF9 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
CDCA5Q96FF9 TK2-204ENST00000525974 1178 ntTSL 2 BASIC24.66■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms