Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APH1AQ96BI3 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.53■□□□□ 0.56
APH1AQ96BI3 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APH1AQ96BI3 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
APH1AQ96BI3 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.53■□□□□ 0.56
APH1AQ96BI3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.53■□□□□ 0.56
APH1AQ96BI3 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
APH1AQ96BI3 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
APH1AQ96BI3 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.53■□□□□ 0.56
APH1AQ96BI3 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
APH1AQ96BI3 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.53■□□□□ 0.56
APH1AQ96BI3 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.53■□□□□ 0.56
APH1AQ96BI3 AC010536.3-201ENST00000620306 533 ntBASIC18.53■□□□□ 0.56
APH1AQ96BI3 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APH1AQ96BI3 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
APH1AQ96BI3 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APH1AQ96BI3 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.53■□□□□ 0.56
APH1AQ96BI3 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APH1AQ96BI3 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.53■□□□□ 0.56
APH1AQ96BI3 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APH1AQ96BI3 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
APH1AQ96BI3 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.53■□□□□ 0.56
APH1AQ96BI3 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.53■□□□□ 0.56
APH1AQ96BI3 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
APH1AQ96BI3 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
APH1AQ96BI3 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.52■□□□□ 0.56
APH1AQ96BI3 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
APH1AQ96BI3 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
APH1AQ96BI3 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
APH1AQ96BI3 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
APH1AQ96BI3 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
APH1AQ96BI3 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.52■□□□□ 0.56
APH1AQ96BI3 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
APH1AQ96BI3 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
APH1AQ96BI3 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
APH1AQ96BI3 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.52■□□□□ 0.56
APH1AQ96BI3 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
APH1AQ96BI3 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
APH1AQ96BI3 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
APH1AQ96BI3 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
APH1AQ96BI3 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
APH1AQ96BI3 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
APH1AQ96BI3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
APH1AQ96BI3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
APH1AQ96BI3 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
APH1AQ96BI3 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
APH1AQ96BI3 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
APH1AQ96BI3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
APH1AQ96BI3 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
APH1AQ96BI3 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
APH1AQ96BI3 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.51■□□□□ 0.55
APH1AQ96BI3 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
APH1AQ96BI3 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.51■□□□□ 0.55
APH1AQ96BI3 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.51■□□□□ 0.55
APH1AQ96BI3 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.51■□□□□ 0.55
APH1AQ96BI3 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.51■□□□□ 0.55
APH1AQ96BI3 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
APH1AQ96BI3 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.51■□□□□ 0.55
APH1AQ96BI3 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
APH1AQ96BI3 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.51■□□□□ 0.55
APH1AQ96BI3 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
APH1AQ96BI3 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
APH1AQ96BI3 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
APH1AQ96BI3 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.5■□□□□ 0.55
APH1AQ96BI3 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
APH1AQ96BI3 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
APH1AQ96BI3 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
APH1AQ96BI3 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.5■□□□□ 0.55
APH1AQ96BI3 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
APH1AQ96BI3 AC245052.3-201ENST00000450182 901 ntBASIC18.5■□□□□ 0.55
APH1AQ96BI3 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.5■□□□□ 0.55
APH1AQ96BI3 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
APH1AQ96BI3 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
APH1AQ96BI3 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.5■□□□□ 0.55
APH1AQ96BI3 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.5■□□□□ 0.55
APH1AQ96BI3 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
APH1AQ96BI3 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
APH1AQ96BI3 RARRES2P11-201ENST00000635158 484 ntBASIC18.5■□□□□ 0.55
APH1AQ96BI3 AC073111.5-205ENST00000641717 521 ntBASIC18.5■□□□□ 0.55
APH1AQ96BI3 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
APH1AQ96BI3 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
APH1AQ96BI3 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.5■□□□□ 0.55
APH1AQ96BI3 LINC00565-201ENST00000562710 2331 ntBASIC18.5■□□□□ 0.55
APH1AQ96BI3 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.5■□□□□ 0.55
APH1AQ96BI3 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
APH1AQ96BI3 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
APH1AQ96BI3 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
APH1AQ96BI3 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
APH1AQ96BI3 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
APH1AQ96BI3 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.49■□□□□ 0.55
APH1AQ96BI3 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
APH1AQ96BI3 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
APH1AQ96BI3 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
APH1AQ96BI3 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
APH1AQ96BI3 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.49■□□□□ 0.55
APH1AQ96BI3 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
APH1AQ96BI3 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
APH1AQ96BI3 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
APH1AQ96BI3 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
APH1AQ96BI3 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms