Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC23.79■■□□□ 1.4
USP6NLQ92738 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.79■■□□□ 1.4
USP6NLQ92738 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC23.79■■□□□ 1.4
USP6NLQ92738 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
USP6NLQ92738 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
USP6NLQ92738 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
USP6NLQ92738 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC23.79■■□□□ 1.4
USP6NLQ92738 RN7SL471P-201ENST00000580476 299 ntBASIC23.79■■□□□ 1.4
USP6NLQ92738 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC23.79■■□□□ 1.4
USP6NLQ92738 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC23.79■■□□□ 1.4
USP6NLQ92738 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
USP6NLQ92738 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
USP6NLQ92738 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
USP6NLQ92738 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
USP6NLQ92738 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
USP6NLQ92738 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
USP6NLQ92738 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
USP6NLQ92738 MCRIP2P1-201ENST00000394346 511 ntBASIC23.78■■□□□ 1.4
USP6NLQ92738 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
USP6NLQ92738 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC23.78■■□□□ 1.4
USP6NLQ92738 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC23.78■■□□□ 1.4
USP6NLQ92738 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
USP6NLQ92738 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
USP6NLQ92738 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
USP6NLQ92738 AL589743.5-201ENST00000616611 1050 ntBASIC23.78■■□□□ 1.4
USP6NLQ92738 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
USP6NLQ92738 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
USP6NLQ92738 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
USP6NLQ92738 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC23.77■■□□□ 1.4
USP6NLQ92738 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC23.77■■□□□ 1.4
USP6NLQ92738 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
USP6NLQ92738 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
USP6NLQ92738 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
USP6NLQ92738 VMO1-204ENST00000441199 741 ntTSL 2 BASIC23.77■■□□□ 1.4
USP6NLQ92738 CDV3P1-201ENST00000471403 739 ntBASIC23.77■■□□□ 1.4
USP6NLQ92738 MIR4497-201ENST00000583208 89 ntBASIC23.77■■□□□ 1.4
USP6NLQ92738 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
USP6NLQ92738 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
USP6NLQ92738 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.77■■□□□ 1.4
USP6NLQ92738 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
USP6NLQ92738 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
USP6NLQ92738 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC23.77■■□□□ 1.4
USP6NLQ92738 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
USP6NLQ92738 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
USP6NLQ92738 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC23.77■■□□□ 1.4
USP6NLQ92738 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
USP6NLQ92738 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
USP6NLQ92738 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
USP6NLQ92738 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
USP6NLQ92738 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
USP6NLQ92738 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
USP6NLQ92738 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
USP6NLQ92738 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC23.76■■□□□ 1.39
USP6NLQ92738 Z99916.2-201ENST00000604037 246 ntBASIC23.76■■□□□ 1.39
USP6NLQ92738 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.76■■□□□ 1.39
USP6NLQ92738 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.76■■□□□ 1.39
USP6NLQ92738 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
USP6NLQ92738 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.75■■□□□ 1.39
USP6NLQ92738 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
USP6NLQ92738 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC23.75■■□□□ 1.39
USP6NLQ92738 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
USP6NLQ92738 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC23.75■■□□□ 1.39
USP6NLQ92738 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
USP6NLQ92738 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
USP6NLQ92738 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
USP6NLQ92738 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
USP6NLQ92738 MIR718-201ENST00000390190 70 ntBASIC23.75■■□□□ 1.39
USP6NLQ92738 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC23.75■■□□□ 1.39
USP6NLQ92738 AC245052.3-201ENST00000450182 901 ntBASIC23.75■■□□□ 1.39
USP6NLQ92738 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC23.75■■□□□ 1.39
USP6NLQ92738 SLC29A4P2-201ENST00000504749 1089 ntBASIC23.75■■□□□ 1.39
USP6NLQ92738 C1QBPP2-201ENST00000528754 825 ntBASIC23.75■■□□□ 1.39
USP6NLQ92738 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC23.75■■□□□ 1.39
USP6NLQ92738 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC23.75■■□□□ 1.39
USP6NLQ92738 AC233263.1-201ENST00000578059 224 ntBASIC23.75■■□□□ 1.39
USP6NLQ92738 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC23.75■■□□□ 1.39
USP6NLQ92738 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
USP6NLQ92738 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC23.75■■□□□ 1.39
USP6NLQ92738 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
USP6NLQ92738 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.75■■□□□ 1.39
USP6NLQ92738 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
USP6NLQ92738 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
USP6NLQ92738 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC23.74■■□□□ 1.39
USP6NLQ92738 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
USP6NLQ92738 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC23.74■■□□□ 1.39
USP6NLQ92738 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
USP6NLQ92738 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
USP6NLQ92738 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
USP6NLQ92738 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
USP6NLQ92738 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC23.74■■□□□ 1.39
USP6NLQ92738 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC23.74■■□□□ 1.39
USP6NLQ92738 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC23.74■■□□□ 1.39
USP6NLQ92738 GCK-205ENST00000437084 1385 ntTSL 5 BASIC23.74■■□□□ 1.39
USP6NLQ92738 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
USP6NLQ92738 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
USP6NLQ92738 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
USP6NLQ92738 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
USP6NLQ92738 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC23.73■■□□□ 1.39
USP6NLQ92738 KRT18P68-201ENST00000392293 1000 ntBASIC23.73■■□□□ 1.39
USP6NLQ92738 SAPCD2P1-201ENST00000395413 1184 ntBASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms