Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
AP3S1Q92572 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
AP3S1Q92572 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
AP3S1Q92572 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.4■□□□□ 0.54
AP3S1Q92572 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
AP3S1Q92572 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
AP3S1Q92572 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
AP3S1Q92572 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.4■□□□□ 0.54
AP3S1Q92572 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.4■□□□□ 0.54
AP3S1Q92572 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.4■□□□□ 0.54
AP3S1Q92572 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
AP3S1Q92572 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.4■□□□□ 0.54
AP3S1Q92572 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
AP3S1Q92572 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.4■□□□□ 0.54
AP3S1Q92572 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.4■□□□□ 0.54
AP3S1Q92572 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.4■□□□□ 0.54
AP3S1Q92572 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
AP3S1Q92572 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
AP3S1Q92572 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
AP3S1Q92572 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
AP3S1Q92572 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
AP3S1Q92572 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
AP3S1Q92572 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
AP3S1Q92572 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
AP3S1Q92572 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
AP3S1Q92572 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
AP3S1Q92572 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP3S1Q92572 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
AP3S1Q92572 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
AP3S1Q92572 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP3S1Q92572 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP3S1Q92572 IDNK-201ENST00000376417 511 ntTSL 5 BASIC18.39■□□□□ 0.53
AP3S1Q92572 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP3S1Q92572 MIR6722-201ENST00000617286 78 ntBASIC18.39■□□□□ 0.53
AP3S1Q92572 AL031602.1-201ENST00000633169 911 ntBASIC18.39■□□□□ 0.53
AP3S1Q92572 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP3S1Q92572 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP3S1Q92572 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.39■□□□□ 0.53
AP3S1Q92572 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
AP3S1Q92572 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP3S1Q92572 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.39■□□□□ 0.53
AP3S1Q92572 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP3S1Q92572 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP3S1Q92572 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
AP3S1Q92572 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP3S1Q92572 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP3S1Q92572 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.38■□□□□ 0.53
AP3S1Q92572 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
AP3S1Q92572 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
AP3S1Q92572 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP3S1Q92572 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
AP3S1Q92572 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.38■□□□□ 0.53
AP3S1Q92572 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP3S1Q92572 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
AP3S1Q92572 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.38■□□□□ 0.53
AP3S1Q92572 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.38■□□□□ 0.53
AP3S1Q92572 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP3S1Q92572 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
AP3S1Q92572 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP3S1Q92572 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP3S1Q92572 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
AP3S1Q92572 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP3S1Q92572 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.37■□□□□ 0.53
AP3S1Q92572 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP3S1Q92572 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP3S1Q92572 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
AP3S1Q92572 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
AP3S1Q92572 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP3S1Q92572 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.37■□□□□ 0.53
AP3S1Q92572 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP3S1Q92572 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.37■□□□□ 0.53
AP3S1Q92572 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP3S1Q92572 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP3S1Q92572 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
AP3S1Q92572 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP3S1Q92572 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.37■□□□□ 0.53
AP3S1Q92572 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP3S1Q92572 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AP3S1Q92572 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
AP3S1Q92572 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
AP3S1Q92572 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
AP3S1Q92572 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP3S1Q92572 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP3S1Q92572 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP3S1Q92572 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP3S1Q92572 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
AP3S1Q92572 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
AP3S1Q92572 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
AP3S1Q92572 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.36■□□□□ 0.53
AP3S1Q92572 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC18.36■□□□□ 0.53
AP3S1Q92572 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
AP3S1Q92572 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP3S1Q92572 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.35■□□□□ 0.53
AP3S1Q92572 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.35■□□□□ 0.53
AP3S1Q92572 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
AP3S1Q92572 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
AP3S1Q92572 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP3S1Q92572 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC18.35■□□□□ 0.53
AP3S1Q92572 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.35■□□□□ 0.53
AP3S1Q92572 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms