Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SHC3Q92529 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SHC3Q92529 KRT16P2-201ENST00000414673 1423 ntBASIC22.33■■□□□ 1.17
SHC3Q92529 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SHC3Q92529 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SHC3Q92529 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SHC3Q92529 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
SHC3Q92529 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SHC3Q92529 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC22.33■■□□□ 1.17
SHC3Q92529 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
SHC3Q92529 AP001160.3-201ENST00000601484 763 ntBASIC22.33■■□□□ 1.17
SHC3Q92529 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
SHC3Q92529 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC22.33■■□□□ 1.16
SHC3Q92529 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
SHC3Q92529 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC22.32■■□□□ 1.16
SHC3Q92529 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SHC3Q92529 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
SHC3Q92529 PLK5-205ENST00000642079 1969 ntBASIC22.32■■□□□ 1.16
SHC3Q92529 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SHC3Q92529 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SHC3Q92529 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SHC3Q92529 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC22.32■■□□□ 1.16
SHC3Q92529 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SHC3Q92529 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC22.32■■□□□ 1.16
SHC3Q92529 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SHC3Q92529 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SHC3Q92529 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
SHC3Q92529 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SHC3Q92529 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC22.32■■□□□ 1.16
SHC3Q92529 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SHC3Q92529 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
SHC3Q92529 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
SHC3Q92529 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC22.31■■□□□ 1.16
SHC3Q92529 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SHC3Q92529 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC22.31■■□□□ 1.16
SHC3Q92529 TESC-206ENST00000541210 936 ntTSL 3 BASIC22.31■■□□□ 1.16
SHC3Q92529 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC22.31■■□□□ 1.16
SHC3Q92529 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
SHC3Q92529 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC22.31■■□□□ 1.16
SHC3Q92529 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SHC3Q92529 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
SHC3Q92529 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SHC3Q92529 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SHC3Q92529 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SHC3Q92529 EXOC3-AS1-202ENST00000623673 1663 ntBASIC22.3■■□□□ 1.16
SHC3Q92529 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC22.3■■□□□ 1.16
SHC3Q92529 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SHC3Q92529 AC097381.1-201ENST00000429019 1296 ntBASIC22.3■■□□□ 1.16
SHC3Q92529 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC22.3■■□□□ 1.16
SHC3Q92529 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC22.3■■□□□ 1.16
SHC3Q92529 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SHC3Q92529 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
SHC3Q92529 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
SHC3Q92529 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
SHC3Q92529 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SHC3Q92529 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC22.29■■□□□ 1.16
SHC3Q92529 HACD1-201ENST00000326961 773 ntTSL 2 BASIC22.29■■□□□ 1.16
SHC3Q92529 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
SHC3Q92529 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
SHC3Q92529 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC22.29■■□□□ 1.16
SHC3Q92529 MIR6821-201ENST00000617625 74 ntBASIC22.29■■□□□ 1.16
SHC3Q92529 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC22.29■■□□□ 1.16
SHC3Q92529 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC22.29■■□□□ 1.16
SHC3Q92529 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SHC3Q92529 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SHC3Q92529 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
SHC3Q92529 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SHC3Q92529 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC22.28■■□□□ 1.16
SHC3Q92529 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SHC3Q92529 ERF-202ENST00000440177 2032 ntTSL 2 BASIC22.28■■□□□ 1.16
SHC3Q92529 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
SHC3Q92529 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SHC3Q92529 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SHC3Q92529 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SHC3Q92529 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
SHC3Q92529 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC22.28■■□□□ 1.16
SHC3Q92529 SLC7A5P2-201ENST00000553010 536 ntBASIC22.28■■□□□ 1.16
SHC3Q92529 RARRES2P11-201ENST00000635158 484 ntBASIC22.28■■□□□ 1.16
SHC3Q92529 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SHC3Q92529 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SHC3Q92529 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC22.28■■□□□ 1.16
SHC3Q92529 AC121338.2-201ENST00000622535 1744 ntBASIC22.28■■□□□ 1.16
SHC3Q92529 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SHC3Q92529 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC22.27■■□□□ 1.16
SHC3Q92529 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC22.27■■□□□ 1.16
SHC3Q92529 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC22.27■■□□□ 1.16
SHC3Q92529 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.27■■□□□ 1.16
SHC3Q92529 AC006128.1-201ENST00000624704 1661 ntBASIC22.27■■□□□ 1.16
SHC3Q92529 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SHC3Q92529 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SHC3Q92529 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SHC3Q92529 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SHC3Q92529 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SHC3Q92529 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SHC3Q92529 KRT18P20-201ENST00000548986 1279 ntBASIC22.27■■□□□ 1.16
SHC3Q92529 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
SHC3Q92529 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SHC3Q92529 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC22.27■■□□□ 1.16
SHC3Q92529 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
SHC3Q92529 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms