Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC25.66■■□□□ 1.7
SNED1Q8TER0 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SNED1Q8TER0 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC25.66■■□□□ 1.7
SNED1Q8TER0 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC25.66■■□□□ 1.7
SNED1Q8TER0 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC25.66■■□□□ 1.7
SNED1Q8TER0 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC25.66■■□□□ 1.7
SNED1Q8TER0 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SNED1Q8TER0 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SNED1Q8TER0 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
SNED1Q8TER0 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
SNED1Q8TER0 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC25.66■■□□□ 1.7
SNED1Q8TER0 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SNED1Q8TER0 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
SNED1Q8TER0 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC25.65■■□□□ 1.7
SNED1Q8TER0 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SNED1Q8TER0 PKM-204ENST00000449901 2526 ntTSL 2 BASIC25.65■■□□□ 1.7
SNED1Q8TER0 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SNED1Q8TER0 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC25.65■■□□□ 1.7
SNED1Q8TER0 GXYLT1P3-201ENST00000453058 1193 ntBASIC25.65■■□□□ 1.7
SNED1Q8TER0 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC25.65■■□□□ 1.7
SNED1Q8TER0 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
SNED1Q8TER0 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC25.65■■□□□ 1.7
SNED1Q8TER0 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC25.65■■□□□ 1.7
SNED1Q8TER0 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
SNED1Q8TER0 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC25.64■■□□□ 1.7
SNED1Q8TER0 MCRIP2P1-201ENST00000394346 511 ntBASIC25.64■■□□□ 1.7
SNED1Q8TER0 ECEL1P3-201ENST00000427961 737 ntBASIC25.64■■□□□ 1.7
SNED1Q8TER0 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC25.64■■□□□ 1.7
SNED1Q8TER0 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC25.64■■□□□ 1.7
SNED1Q8TER0 AL589743.5-201ENST00000616611 1050 ntBASIC25.64■■□□□ 1.7
SNED1Q8TER0 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.7
SNED1Q8TER0 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
SNED1Q8TER0 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.69
SNED1Q8TER0 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
SNED1Q8TER0 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
SNED1Q8TER0 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.69
SNED1Q8TER0 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
SNED1Q8TER0 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SNED1Q8TER0 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SNED1Q8TER0 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SNED1Q8TER0 SNORA78-201ENST00000459373 127 ntBASIC25.63■■□□□ 1.69
SNED1Q8TER0 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SNED1Q8TER0 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SNED1Q8TER0 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC25.63■■□□□ 1.69
SNED1Q8TER0 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SNED1Q8TER0 AC092368.3-202ENST00000574180 1591 ntBASIC25.63■■□□□ 1.69
SNED1Q8TER0 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SNED1Q8TER0 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SNED1Q8TER0 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SNED1Q8TER0 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC25.63■■□□□ 1.69
SNED1Q8TER0 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
SNED1Q8TER0 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SNED1Q8TER0 MDFI-202ENST00000373050 809 ntTSL 2 BASIC25.63■■□□□ 1.69
SNED1Q8TER0 SAPCD2P1-201ENST00000395413 1184 ntBASIC25.63■■□□□ 1.69
SNED1Q8TER0 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC25.63■■□□□ 1.69
SNED1Q8TER0 VMO1-204ENST00000441199 741 ntTSL 2 BASIC25.63■■□□□ 1.69
SNED1Q8TER0 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SNED1Q8TER0 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SNED1Q8TER0 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC25.62■■□□□ 1.69
SNED1Q8TER0 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
SNED1Q8TER0 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
SNED1Q8TER0 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
SNED1Q8TER0 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SNED1Q8TER0 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SNED1Q8TER0 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SNED1Q8TER0 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SNED1Q8TER0 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
SNED1Q8TER0 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC25.62■■□□□ 1.69
SNED1Q8TER0 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SNED1Q8TER0 SOX15-203ENST00000570788 1093 ntBASIC25.62■■□□□ 1.69
SNED1Q8TER0 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
SNED1Q8TER0 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC25.62■■□□□ 1.69
SNED1Q8TER0 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC25.62■■□□□ 1.69
SNED1Q8TER0 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC25.61■■□□□ 1.69
SNED1Q8TER0 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SNED1Q8TER0 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SNED1Q8TER0 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SNED1Q8TER0 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC25.61■■□□□ 1.69
SNED1Q8TER0 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SNED1Q8TER0 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
SNED1Q8TER0 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC25.61■■□□□ 1.69
SNED1Q8TER0 FAM197Y4-202ENST00000622692 608 ntBASIC25.61■■□□□ 1.69
SNED1Q8TER0 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
SNED1Q8TER0 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SNED1Q8TER0 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
SNED1Q8TER0 GCK-205ENST00000437084 1385 ntTSL 5 BASIC25.6■■□□□ 1.69
SNED1Q8TER0 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC25.6■■□□□ 1.69
SNED1Q8TER0 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SNED1Q8TER0 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC25.6■■□□□ 1.69
SNED1Q8TER0 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SNED1Q8TER0 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC25.6■■□□□ 1.69
SNED1Q8TER0 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SNED1Q8TER0 FAM210CP-201ENST00000445714 574 ntBASIC25.6■■□□□ 1.69
SNED1Q8TER0 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC25.6■■□□□ 1.69
SNED1Q8TER0 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
SNED1Q8TER0 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC25.6■■□□□ 1.69
SNED1Q8TER0 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC25.6■■□□□ 1.69
SNED1Q8TER0 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SNED1Q8TER0 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SNED1Q8TER0 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms