Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CNIH3Q8TBE1 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CNIH3Q8TBE1 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNIH3Q8TBE1 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNIH3Q8TBE1 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CNIH3Q8TBE1 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CNIH3Q8TBE1 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNIH3Q8TBE1 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNIH3Q8TBE1 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNIH3Q8TBE1 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNIH3Q8TBE1 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNIH3Q8TBE1 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.09■□□□□ 0.65
CNIH3Q8TBE1 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNIH3Q8TBE1 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.09■□□□□ 0.65
CNIH3Q8TBE1 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNIH3Q8TBE1 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.09■□□□□ 0.65
CNIH3Q8TBE1 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CNIH3Q8TBE1 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CNIH3Q8TBE1 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
CNIH3Q8TBE1 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CNIH3Q8TBE1 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
CNIH3Q8TBE1 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CNIH3Q8TBE1 YBX1P4-201ENST00000392794 808 ntBASIC19.08■□□□□ 0.64
CNIH3Q8TBE1 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
CNIH3Q8TBE1 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CNIH3Q8TBE1 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CNIH3Q8TBE1 Z92544.1-202ENST00000571933 1220 ntBASIC19.08■□□□□ 0.64
CNIH3Q8TBE1 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.08■□□□□ 0.64
CNIH3Q8TBE1 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CNIH3Q8TBE1 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
CNIH3Q8TBE1 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CNIH3Q8TBE1 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CNIH3Q8TBE1 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.08■□□□□ 0.64
CNIH3Q8TBE1 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.08■□□□□ 0.64
CNIH3Q8TBE1 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CNIH3Q8TBE1 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
CNIH3Q8TBE1 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.08■□□□□ 0.64
CNIH3Q8TBE1 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNIH3Q8TBE1 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
CNIH3Q8TBE1 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.07■□□□□ 0.64
CNIH3Q8TBE1 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CNIH3Q8TBE1 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNIH3Q8TBE1 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNIH3Q8TBE1 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNIH3Q8TBE1 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.07■□□□□ 0.64
CNIH3Q8TBE1 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.07■□□□□ 0.64
CNIH3Q8TBE1 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
CNIH3Q8TBE1 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.07■□□□□ 0.64
CNIH3Q8TBE1 AL031848.2-201ENST00000607670 837 ntBASIC19.07■□□□□ 0.64
CNIH3Q8TBE1 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
CNIH3Q8TBE1 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
CNIH3Q8TBE1 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNIH3Q8TBE1 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNIH3Q8TBE1 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CNIH3Q8TBE1 AL512408.1-201ENST00000569378 2000 ntBASIC19.07■□□□□ 0.64
CNIH3Q8TBE1 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNIH3Q8TBE1 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNIH3Q8TBE1 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
CNIH3Q8TBE1 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CNIH3Q8TBE1 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CNIH3Q8TBE1 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNIH3Q8TBE1 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNIH3Q8TBE1 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CNIH3Q8TBE1 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.06■□□□□ 0.64
CNIH3Q8TBE1 AC007225.1-201ENST00000566331 1836 ntBASIC19.06■□□□□ 0.64
CNIH3Q8TBE1 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNIH3Q8TBE1 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CNIH3Q8TBE1 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNIH3Q8TBE1 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNIH3Q8TBE1 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.06■□□□□ 0.64
CNIH3Q8TBE1 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNIH3Q8TBE1 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNIH3Q8TBE1 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNIH3Q8TBE1 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNIH3Q8TBE1 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNIH3Q8TBE1 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
CNIH3Q8TBE1 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.05■□□□□ 0.64
CNIH3Q8TBE1 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.05■□□□□ 0.64
CNIH3Q8TBE1 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CNIH3Q8TBE1 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
CNIH3Q8TBE1 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNIH3Q8TBE1 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CNIH3Q8TBE1 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNIH3Q8TBE1 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CNIH3Q8TBE1 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CNIH3Q8TBE1 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.05■□□□□ 0.64
CNIH3Q8TBE1 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
CNIH3Q8TBE1 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNIH3Q8TBE1 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNIH3Q8TBE1 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNIH3Q8TBE1 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CNIH3Q8TBE1 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNIH3Q8TBE1 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.05■□□□□ 0.64
CNIH3Q8TBE1 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CNIH3Q8TBE1 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.05■□□□□ 0.64
CNIH3Q8TBE1 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.05■□□□□ 0.64
CNIH3Q8TBE1 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNIH3Q8TBE1 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNIH3Q8TBE1 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNIH3Q8TBE1 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms