Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CFAP61Q8NHU2 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.04■□□□□ 0.96
CFAP61Q8NHU2 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CFAP61Q8NHU2 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CFAP61Q8NHU2 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CFAP61Q8NHU2 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.04■□□□□ 0.96
CFAP61Q8NHU2 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.04■□□□□ 0.96
CFAP61Q8NHU2 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.04■□□□□ 0.96
CFAP61Q8NHU2 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.04■□□□□ 0.96
CFAP61Q8NHU2 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.04■□□□□ 0.96
CFAP61Q8NHU2 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CFAP61Q8NHU2 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CFAP61Q8NHU2 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CFAP61Q8NHU2 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CFAP61Q8NHU2 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CFAP61Q8NHU2 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CFAP61Q8NHU2 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CFAP61Q8NHU2 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CFAP61Q8NHU2 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CFAP61Q8NHU2 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.04■□□□□ 0.96
CFAP61Q8NHU2 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CFAP61Q8NHU2 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.04■□□□□ 0.96
CFAP61Q8NHU2 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CFAP61Q8NHU2 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.03■□□□□ 0.96
CFAP61Q8NHU2 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.03■□□□□ 0.96
CFAP61Q8NHU2 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.03■□□□□ 0.96
CFAP61Q8NHU2 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.03■□□□□ 0.96
CFAP61Q8NHU2 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.03■□□□□ 0.96
CFAP61Q8NHU2 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.03■□□□□ 0.96
CFAP61Q8NHU2 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.03■□□□□ 0.96
CFAP61Q8NHU2 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.03■□□□□ 0.96
CFAP61Q8NHU2 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CFAP61Q8NHU2 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.03■□□□□ 0.96
CFAP61Q8NHU2 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CFAP61Q8NHU2 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CFAP61Q8NHU2 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CFAP61Q8NHU2 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CFAP61Q8NHU2 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CFAP61Q8NHU2 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CFAP61Q8NHU2 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CFAP61Q8NHU2 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CFAP61Q8NHU2 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
CFAP61Q8NHU2 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CFAP61Q8NHU2 AL354811.1-201ENST00000610286 706 ntBASIC21.02■□□□□ 0.96
CFAP61Q8NHU2 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CFAP61Q8NHU2 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.02■□□□□ 0.96
CFAP61Q8NHU2 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.02■□□□□ 0.96
CFAP61Q8NHU2 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CFAP61Q8NHU2 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.02■□□□□ 0.96
CFAP61Q8NHU2 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.02■□□□□ 0.95
CFAP61Q8NHU2 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CFAP61Q8NHU2 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
CFAP61Q8NHU2 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CFAP61Q8NHU2 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.01■□□□□ 0.95
CFAP61Q8NHU2 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CFAP61Q8NHU2 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
CFAP61Q8NHU2 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CFAP61Q8NHU2 AL358852.1-201ENST00000623174 1268 ntBASIC21.01■□□□□ 0.95
CFAP61Q8NHU2 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CFAP61Q8NHU2 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CFAP61Q8NHU2 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CFAP61Q8NHU2 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CFAP61Q8NHU2 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CFAP61Q8NHU2 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.01■□□□□ 0.95
CFAP61Q8NHU2 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21■□□□□ 0.95
CFAP61Q8NHU2 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CFAP61Q8NHU2 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CFAP61Q8NHU2 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CFAP61Q8NHU2 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21■□□□□ 0.95
CFAP61Q8NHU2 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21■□□□□ 0.95
CFAP61Q8NHU2 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21■□□□□ 0.95
CFAP61Q8NHU2 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21■□□□□ 0.95
CFAP61Q8NHU2 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
CFAP61Q8NHU2 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CFAP61Q8NHU2 NT5C3AP1-201ENST00000394500 1012 ntBASIC21■□□□□ 0.95
CFAP61Q8NHU2 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21■□□□□ 0.95
CFAP61Q8NHU2 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21■□□□□ 0.95
CFAP61Q8NHU2 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CFAP61Q8NHU2 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CFAP61Q8NHU2 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21■□□□□ 0.95
CFAP61Q8NHU2 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21■□□□□ 0.95
CFAP61Q8NHU2 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21■□□□□ 0.95
CFAP61Q8NHU2 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21■□□□□ 0.95
CFAP61Q8NHU2 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21■□□□□ 0.95
CFAP61Q8NHU2 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CFAP61Q8NHU2 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.99■□□□□ 0.95
CFAP61Q8NHU2 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CFAP61Q8NHU2 BX005040.4-201ENST00000637145 1518 ntBASIC20.99■□□□□ 0.95
CFAP61Q8NHU2 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.99■□□□□ 0.95
CFAP61Q8NHU2 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CFAP61Q8NHU2 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
CFAP61Q8NHU2 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CFAP61Q8NHU2 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.99■□□□□ 0.95
CFAP61Q8NHU2 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.99■□□□□ 0.95
CFAP61Q8NHU2 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.99■□□□□ 0.95
CFAP61Q8NHU2 AL034346.1-201ENST00000568244 1277 ntBASIC20.99■□□□□ 0.95
CFAP61Q8NHU2 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.99■□□□□ 0.95
CFAP61Q8NHU2 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CFAP61Q8NHU2 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
CFAP61Q8NHU2 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms