Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.2■□□□□ 0.82
LINC01555Q8NAE3 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LINC01555Q8NAE3 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.2■□□□□ 0.82
LINC01555Q8NAE3 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.2■□□□□ 0.82
LINC01555Q8NAE3 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
LINC01555Q8NAE3 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
LINC01555Q8NAE3 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LINC01555Q8NAE3 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LINC01555Q8NAE3 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
LINC01555Q8NAE3 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.2■□□□□ 0.82
LINC01555Q8NAE3 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
LINC01555Q8NAE3 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LINC01555Q8NAE3 RBM17P2-201ENST00000616397 1405 ntBASIC20.19■□□□□ 0.82
LINC01555Q8NAE3 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LINC01555Q8NAE3 AL024507.2-201ENST00000606070 2574 ntBASIC20.19■□□□□ 0.82
LINC01555Q8NAE3 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LINC01555Q8NAE3 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.19■□□□□ 0.82
LINC01555Q8NAE3 RARRES2P11-201ENST00000635158 484 ntBASIC20.19■□□□□ 0.82
LINC01555Q8NAE3 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.19■□□□□ 0.82
LINC01555Q8NAE3 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LINC01555Q8NAE3 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LINC01555Q8NAE3 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.19■□□□□ 0.82
LINC01555Q8NAE3 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LINC01555Q8NAE3 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LINC01555Q8NAE3 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
LINC01555Q8NAE3 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
LINC01555Q8NAE3 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.18■□□□□ 0.82
LINC01555Q8NAE3 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LINC01555Q8NAE3 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LINC01555Q8NAE3 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.18■□□□□ 0.82
LINC01555Q8NAE3 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.18■□□□□ 0.82
LINC01555Q8NAE3 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LINC01555Q8NAE3 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.18■□□□□ 0.82
LINC01555Q8NAE3 CNN2P6-201ENST00000439038 900 ntBASIC20.18■□□□□ 0.82
LINC01555Q8NAE3 TERF1P5-201ENST00000477545 1207 ntBASIC20.18■□□□□ 0.82
LINC01555Q8NAE3 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.18■□□□□ 0.82
LINC01555Q8NAE3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LINC01555Q8NAE3 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
LINC01555Q8NAE3 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.18■□□□□ 0.82
LINC01555Q8NAE3 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.18■□□□□ 0.82
LINC01555Q8NAE3 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LINC01555Q8NAE3 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
LINC01555Q8NAE3 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LINC01555Q8NAE3 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
LINC01555Q8NAE3 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.17■□□□□ 0.82
LINC01555Q8NAE3 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
LINC01555Q8NAE3 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
LINC01555Q8NAE3 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
LINC01555Q8NAE3 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
LINC01555Q8NAE3 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.17■□□□□ 0.82
LINC01555Q8NAE3 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LINC01555Q8NAE3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LINC01555Q8NAE3 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LINC01555Q8NAE3 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.17■□□□□ 0.82
LINC01555Q8NAE3 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.16■□□□□ 0.82
LINC01555Q8NAE3 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
LINC01555Q8NAE3 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LINC01555Q8NAE3 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.16■□□□□ 0.82
LINC01555Q8NAE3 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
LINC01555Q8NAE3 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LINC01555Q8NAE3 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.16■□□□□ 0.82
LINC01555Q8NAE3 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
LINC01555Q8NAE3 AC243732.1-201ENST00000612648 864 ntBASIC20.16■□□□□ 0.82
LINC01555Q8NAE3 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.16■□□□□ 0.82
LINC01555Q8NAE3 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LINC01555Q8NAE3 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
LINC01555Q8NAE3 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
LINC01555Q8NAE3 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
LINC01555Q8NAE3 FEM1AP4-201ENST00000443167 1987 ntBASIC20.15■□□□□ 0.82
LINC01555Q8NAE3 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LINC01555Q8NAE3 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
LINC01555Q8NAE3 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.15■□□□□ 0.82
LINC01555Q8NAE3 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.15■□□□□ 0.82
LINC01555Q8NAE3 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.15■□□□□ 0.82
LINC01555Q8NAE3 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.15■□□□□ 0.82
LINC01555Q8NAE3 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LINC01555Q8NAE3 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.15■□□□□ 0.82
LINC01555Q8NAE3 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.15■□□□□ 0.82
LINC01555Q8NAE3 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LINC01555Q8NAE3 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.15■□□□□ 0.82
LINC01555Q8NAE3 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LINC01555Q8NAE3 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.15■□□□□ 0.82
LINC01555Q8NAE3 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LINC01555Q8NAE3 AF106564.1-201ENST00000607058 2553 ntBASIC20.14■□□□□ 0.82
LINC01555Q8NAE3 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LINC01555Q8NAE3 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.14■□□□□ 0.81
LINC01555Q8NAE3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LINC01555Q8NAE3 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LINC01555Q8NAE3 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LINC01555Q8NAE3 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.14■□□□□ 0.81
LINC01555Q8NAE3 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.14■□□□□ 0.81
LINC01555Q8NAE3 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.14■□□□□ 0.81
LINC01555Q8NAE3 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LINC01555Q8NAE3 AC245052.3-201ENST00000450182 901 ntBASIC20.14■□□□□ 0.81
LINC01555Q8NAE3 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.14■□□□□ 0.81
LINC01555Q8NAE3 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.14■□□□□ 0.81
LINC01555Q8NAE3 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.14■□□□□ 0.81
LINC01555Q8NAE3 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.14■□□□□ 0.81
LINC01555Q8NAE3 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
LINC01555Q8NAE3 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms