Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
C3orf56Q8N813 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
C3orf56Q8N813 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC16.38■□□□□ 0.21
C3orf56Q8N813 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
C3orf56Q8N813 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
C3orf56Q8N813 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
C3orf56Q8N813 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
C3orf56Q8N813 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
C3orf56Q8N813 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
C3orf56Q8N813 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
C3orf56Q8N813 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
C3orf56Q8N813 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
C3orf56Q8N813 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC16.37■□□□□ 0.21
C3orf56Q8N813 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC16.37■□□□□ 0.21
C3orf56Q8N813 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC16.37■□□□□ 0.21
C3orf56Q8N813 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
C3orf56Q8N813 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC16.37■□□□□ 0.21
C3orf56Q8N813 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC16.37■□□□□ 0.21
C3orf56Q8N813 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
C3orf56Q8N813 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
C3orf56Q8N813 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
C3orf56Q8N813 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
C3orf56Q8N813 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
C3orf56Q8N813 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
C3orf56Q8N813 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
C3orf56Q8N813 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
C3orf56Q8N813 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
C3orf56Q8N813 AC012618.2-201ENST00000428058 849 ntBASIC16.36■□□□□ 0.21
C3orf56Q8N813 CDV3P1-201ENST00000471403 739 ntBASIC16.36■□□□□ 0.21
C3orf56Q8N813 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
C3orf56Q8N813 CD44-222ENST00000526025 1052 ntTSL 2 BASIC16.36■□□□□ 0.21
C3orf56Q8N813 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
C3orf56Q8N813 REXO2-208ENST00000539754 791 ntTSL 2 BASIC16.36■□□□□ 0.21
C3orf56Q8N813 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.36■□□□□ 0.21
C3orf56Q8N813 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.36■□□□□ 0.21
C3orf56Q8N813 SOX15-203ENST00000570788 1093 ntBASIC16.36■□□□□ 0.21
C3orf56Q8N813 AC069544.1-201ENST00000609399 999 ntBASIC16.36■□□□□ 0.21
C3orf56Q8N813 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC16.36■□□□□ 0.21
C3orf56Q8N813 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
C3orf56Q8N813 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
C3orf56Q8N813 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC16.36■□□□□ 0.21
C3orf56Q8N813 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
C3orf56Q8N813 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
C3orf56Q8N813 MED17-227ENST00000640521 2047 ntTSL 5 BASIC16.35■□□□□ 0.21
C3orf56Q8N813 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
C3orf56Q8N813 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.35■□□□□ 0.21
C3orf56Q8N813 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
C3orf56Q8N813 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
C3orf56Q8N813 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.35■□□□□ 0.21
C3orf56Q8N813 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC16.35■□□□□ 0.21
C3orf56Q8N813 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
C3orf56Q8N813 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
C3orf56Q8N813 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
C3orf56Q8N813 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
C3orf56Q8N813 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
C3orf56Q8N813 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
C3orf56Q8N813 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
C3orf56Q8N813 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC16.35■□□□□ 0.21
C3orf56Q8N813 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
C3orf56Q8N813 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
C3orf56Q8N813 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
C3orf56Q8N813 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.34■□□□□ 0.21
C3orf56Q8N813 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
C3orf56Q8N813 RPS2P55-201ENST00000397318 883 ntBASIC16.34■□□□□ 0.21
C3orf56Q8N813 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.34■□□□□ 0.21
C3orf56Q8N813 TSPY7P-201ENST00000431358 1114 ntBASIC16.34■□□□□ 0.21
C3orf56Q8N813 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.34■□□□□ 0.21
C3orf56Q8N813 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
C3orf56Q8N813 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.34■□□□□ 0.21
C3orf56Q8N813 HES2-205ENST00000487437 968 ntTSL 3 BASIC16.34■□□□□ 0.21
C3orf56Q8N813 AC107956.1-201ENST00000494359 873 ntBASIC16.34■□□□□ 0.21
C3orf56Q8N813 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
C3orf56Q8N813 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
C3orf56Q8N813 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.34■□□□□ 0.21
C3orf56Q8N813 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC16.34■□□□□ 0.21
C3orf56Q8N813 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
C3orf56Q8N813 AC100791.3-201ENST00000617619 330 ntBASIC16.34■□□□□ 0.21
C3orf56Q8N813 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
C3orf56Q8N813 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
C3orf56Q8N813 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.34■□□□□ 0.21
C3orf56Q8N813 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
C3orf56Q8N813 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
C3orf56Q8N813 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
C3orf56Q8N813 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
C3orf56Q8N813 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
C3orf56Q8N813 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
C3orf56Q8N813 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
C3orf56Q8N813 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC16.33■□□□□ 0.2
C3orf56Q8N813 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.33■□□□□ 0.2
C3orf56Q8N813 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.33■□□□□ 0.2
C3orf56Q8N813 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
C3orf56Q8N813 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
C3orf56Q8N813 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.33■□□□□ 0.2
C3orf56Q8N813 AC233263.1-201ENST00000578059 224 ntBASIC16.33■□□□□ 0.2
C3orf56Q8N813 AC233702.5-201ENST00000584107 538 ntBASIC16.33■□□□□ 0.2
C3orf56Q8N813 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC16.33■□□□□ 0.2
C3orf56Q8N813 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC16.33■□□□□ 0.2
C3orf56Q8N813 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.33■□□□□ 0.2
C3orf56Q8N813 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
C3orf56Q8N813 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms