Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
EFCAB3Q8N7B9 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
EFCAB3Q8N7B9 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
EFCAB3Q8N7B9 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
EFCAB3Q8N7B9 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.61■□□□□ 0.89
EFCAB3Q8N7B9 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
EFCAB3Q8N7B9 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.61■□□□□ 0.89
EFCAB3Q8N7B9 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
EFCAB3Q8N7B9 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.61■□□□□ 0.89
EFCAB3Q8N7B9 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
EFCAB3Q8N7B9 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
EFCAB3Q8N7B9 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
EFCAB3Q8N7B9 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
EFCAB3Q8N7B9 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
EFCAB3Q8N7B9 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
EFCAB3Q8N7B9 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.6■□□□□ 0.89
EFCAB3Q8N7B9 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
EFCAB3Q8N7B9 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
EFCAB3Q8N7B9 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
EFCAB3Q8N7B9 AC010141.3-201ENST00000456659 717 ntBASIC20.6■□□□□ 0.89
EFCAB3Q8N7B9 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.6■□□□□ 0.89
EFCAB3Q8N7B9 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.6■□□□□ 0.89
EFCAB3Q8N7B9 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
EFCAB3Q8N7B9 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.6■□□□□ 0.89
EFCAB3Q8N7B9 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
EFCAB3Q8N7B9 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
EFCAB3Q8N7B9 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
EFCAB3Q8N7B9 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
EFCAB3Q8N7B9 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.6■□□□□ 0.89
EFCAB3Q8N7B9 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EFCAB3Q8N7B9 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
EFCAB3Q8N7B9 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EFCAB3Q8N7B9 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
EFCAB3Q8N7B9 TSPY26P-201ENST00000476365 1326 ntBASIC20.59■□□□□ 0.89
EFCAB3Q8N7B9 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
EFCAB3Q8N7B9 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.59■□□□□ 0.89
EFCAB3Q8N7B9 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EFCAB3Q8N7B9 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EFCAB3Q8N7B9 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.59■□□□□ 0.89
EFCAB3Q8N7B9 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.59■□□□□ 0.89
EFCAB3Q8N7B9 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.59■□□□□ 0.89
EFCAB3Q8N7B9 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
EFCAB3Q8N7B9 AP005435.1-201ENST00000529293 1178 ntBASIC20.59■□□□□ 0.89
EFCAB3Q8N7B9 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.59■□□□□ 0.89
EFCAB3Q8N7B9 AL358852.1-201ENST00000623174 1268 ntBASIC20.59■□□□□ 0.89
EFCAB3Q8N7B9 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
EFCAB3Q8N7B9 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
EFCAB3Q8N7B9 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EFCAB3Q8N7B9 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EFCAB3Q8N7B9 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.59■□□□□ 0.89
EFCAB3Q8N7B9 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EFCAB3Q8N7B9 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
EFCAB3Q8N7B9 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.58■□□□□ 0.89
EFCAB3Q8N7B9 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
EFCAB3Q8N7B9 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
EFCAB3Q8N7B9 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
EFCAB3Q8N7B9 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
EFCAB3Q8N7B9 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
EFCAB3Q8N7B9 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.58■□□□□ 0.89
EFCAB3Q8N7B9 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.58■□□□□ 0.89
EFCAB3Q8N7B9 DUX4L2-201ENST00000561772 1275 ntBASIC20.58■□□□□ 0.89
EFCAB3Q8N7B9 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.58■□□□□ 0.89
EFCAB3Q8N7B9 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.58■□□□□ 0.89
EFCAB3Q8N7B9 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.58■□□□□ 0.89
EFCAB3Q8N7B9 DUX4L6-201ENST00000626483 1275 ntBASIC20.58■□□□□ 0.89
EFCAB3Q8N7B9 DUX4L1-201ENST00000627662 1275 ntBASIC20.58■□□□□ 0.89
EFCAB3Q8N7B9 DUX4L8-201ENST00000629013 1275 ntBASIC20.58■□□□□ 0.89
EFCAB3Q8N7B9 DUX4L3-201ENST00000630187 1275 ntBASIC20.58■□□□□ 0.89
EFCAB3Q8N7B9 DUX4L7-201ENST00000630678 1275 ntBASIC20.58■□□□□ 0.89
EFCAB3Q8N7B9 DUX4L5-201ENST00000630834 1275 ntBASIC20.58■□□□□ 0.89
EFCAB3Q8N7B9 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.58■□□□□ 0.89
EFCAB3Q8N7B9 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
EFCAB3Q8N7B9 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
EFCAB3Q8N7B9 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
EFCAB3Q8N7B9 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
EFCAB3Q8N7B9 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
EFCAB3Q8N7B9 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.58■□□□□ 0.88
EFCAB3Q8N7B9 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
EFCAB3Q8N7B9 AL391422.3-201ENST00000603791 2761 ntBASIC20.57■□□□□ 0.88
EFCAB3Q8N7B9 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
EFCAB3Q8N7B9 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EFCAB3Q8N7B9 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.57■□□□□ 0.88
EFCAB3Q8N7B9 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
EFCAB3Q8N7B9 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
EFCAB3Q8N7B9 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
EFCAB3Q8N7B9 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
EFCAB3Q8N7B9 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
EFCAB3Q8N7B9 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
EFCAB3Q8N7B9 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.57■□□□□ 0.88
EFCAB3Q8N7B9 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
EFCAB3Q8N7B9 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.57■□□□□ 0.88
EFCAB3Q8N7B9 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
EFCAB3Q8N7B9 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
EFCAB3Q8N7B9 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
EFCAB3Q8N7B9 AC092437.1-201ENST00000624794 1048 ntBASIC20.57■□□□□ 0.88
EFCAB3Q8N7B9 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.57■□□□□ 0.88
EFCAB3Q8N7B9 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
EFCAB3Q8N7B9 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
EFCAB3Q8N7B9 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EFCAB3Q8N7B9 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms