Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAM1L1Q8N609 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAM1L1Q8N609 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAM1L1Q8N609 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
TRAM1L1Q8N609 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
TRAM1L1Q8N609 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.73■□□□□ 0.91
TRAM1L1Q8N609 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAM1L1Q8N609 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAM1L1Q8N609 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAM1L1Q8N609 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.73■□□□□ 0.91
TRAM1L1Q8N609 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.73■□□□□ 0.91
TRAM1L1Q8N609 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.73■□□□□ 0.91
TRAM1L1Q8N609 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
TRAM1L1Q8N609 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.73■□□□□ 0.91
TRAM1L1Q8N609 AC073111.5-205ENST00000641717 521 ntBASIC20.73■□□□□ 0.91
TRAM1L1Q8N609 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAM1L1Q8N609 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
TRAM1L1Q8N609 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAM1L1Q8N609 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.73■□□□□ 0.91
TRAM1L1Q8N609 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.73■□□□□ 0.91
TRAM1L1Q8N609 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.72■□□□□ 0.91
TRAM1L1Q8N609 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRAM1L1Q8N609 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.72■□□□□ 0.91
TRAM1L1Q8N609 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.72■□□□□ 0.91
TRAM1L1Q8N609 RARRES2P11-201ENST00000635158 484 ntBASIC20.72■□□□□ 0.91
TRAM1L1Q8N609 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRAM1L1Q8N609 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TRAM1L1Q8N609 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRAM1L1Q8N609 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRAM1L1Q8N609 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRAM1L1Q8N609 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAM1L1Q8N609 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAM1L1Q8N609 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAM1L1Q8N609 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAM1L1Q8N609 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAM1L1Q8N609 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAM1L1Q8N609 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAM1L1Q8N609 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAM1L1Q8N609 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.71■□□□□ 0.91
TRAM1L1Q8N609 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRAM1L1Q8N609 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.71■□□□□ 0.91
TRAM1L1Q8N609 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
TRAM1L1Q8N609 AC231657.2-201ENST00000624556 255 ntBASIC20.71■□□□□ 0.91
TRAM1L1Q8N609 AC013268.1-206ENST00000638368 961 ntBASIC20.71■□□□□ 0.91
TRAM1L1Q8N609 AC112229.1-201ENST00000639295 961 ntBASIC20.71■□□□□ 0.91
TRAM1L1Q8N609 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAM1L1Q8N609 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRAM1L1Q8N609 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAM1L1Q8N609 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAM1L1Q8N609 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAM1L1Q8N609 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRAM1L1Q8N609 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAM1L1Q8N609 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.7■□□□□ 0.9
TRAM1L1Q8N609 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.7■□□□□ 0.9
TRAM1L1Q8N609 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.7■□□□□ 0.9
TRAM1L1Q8N609 CDCA4P2-201ENST00000441182 718 ntBASIC20.7■□□□□ 0.9
TRAM1L1Q8N609 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.7■□□□□ 0.9
TRAM1L1Q8N609 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.7■□□□□ 0.9
TRAM1L1Q8N609 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.7■□□□□ 0.9
TRAM1L1Q8N609 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.7■□□□□ 0.9
TRAM1L1Q8N609 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAM1L1Q8N609 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAM1L1Q8N609 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRAM1L1Q8N609 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
TRAM1L1Q8N609 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRAM1L1Q8N609 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
TRAM1L1Q8N609 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAM1L1Q8N609 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRAM1L1Q8N609 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.69■□□□□ 0.9
TRAM1L1Q8N609 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRAM1L1Q8N609 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
TRAM1L1Q8N609 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAM1L1Q8N609 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.69■□□□□ 0.9
TRAM1L1Q8N609 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.69■□□□□ 0.9
TRAM1L1Q8N609 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRAM1L1Q8N609 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.69■□□□□ 0.9
TRAM1L1Q8N609 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAM1L1Q8N609 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.69■□□□□ 0.9
TRAM1L1Q8N609 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAM1L1Q8N609 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRAM1L1Q8N609 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.68■□□□□ 0.9
TRAM1L1Q8N609 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.68■□□□□ 0.9
TRAM1L1Q8N609 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.68■□□□□ 0.9
TRAM1L1Q8N609 CNN2P6-201ENST00000439038 900 ntBASIC20.68■□□□□ 0.9
TRAM1L1Q8N609 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.68■□□□□ 0.9
TRAM1L1Q8N609 AC007322.4-201ENST00000509611 723 ntBASIC20.68■□□□□ 0.9
TRAM1L1Q8N609 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
TRAM1L1Q8N609 RAP2CP1-201ENST00000605103 478 ntBASIC20.68■□□□□ 0.9
TRAM1L1Q8N609 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAM1L1Q8N609 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAM1L1Q8N609 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAM1L1Q8N609 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.68■□□□□ 0.9
TRAM1L1Q8N609 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
TRAM1L1Q8N609 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAM1L1Q8N609 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.67■□□□□ 0.9
TRAM1L1Q8N609 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAM1L1Q8N609 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TRAM1L1Q8N609 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAM1L1Q8N609 AC007322.1-201ENST00000426983 750 ntBASIC20.67■□□□□ 0.9
TRAM1L1Q8N609 AC026185.1-201ENST00000445748 174 ntBASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms