Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 AL512408.1-201ENST00000569378 2000 ntBASIC15.68■□□□□ 0.1
HIST3H2BBQ8N257 AC005332.7-201ENST00000614046 2005 ntBASIC15.68■□□□□ 0.1
HIST3H2BBQ8N257 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC15.68■□□□□ 0.1
HIST3H2BBQ8N257 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HIST3H2BBQ8N257 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC15.68■□□□□ 0.1
HIST3H2BBQ8N257 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
HIST3H2BBQ8N257 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
HIST3H2BBQ8N257 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
HIST3H2BBQ8N257 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
HIST3H2BBQ8N257 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC15.68■□□□□ 0.1
HIST3H2BBQ8N257 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
HIST3H2BBQ8N257 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HIST3H2BBQ8N257 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HIST3H2BBQ8N257 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
HIST3H2BBQ8N257 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.67■□□□□ 0.1
HIST3H2BBQ8N257 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HIST3H2BBQ8N257 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HIST3H2BBQ8N257 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
HIST3H2BBQ8N257 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
HIST3H2BBQ8N257 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HIST3H2BBQ8N257 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HIST3H2BBQ8N257 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HIST3H2BBQ8N257 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC15.67■□□□□ 0.1
HIST3H2BBQ8N257 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
HIST3H2BBQ8N257 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
HIST3H2BBQ8N257 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC15.67■□□□□ 0.1
HIST3H2BBQ8N257 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
HIST3H2BBQ8N257 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC15.67■□□□□ 0.1
HIST3H2BBQ8N257 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC15.67■□□□□ 0.1
HIST3H2BBQ8N257 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HIST3H2BBQ8N257 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC15.67■□□□□ 0.1
HIST3H2BBQ8N257 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC15.67■□□□□ 0.1
HIST3H2BBQ8N257 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HIST3H2BBQ8N257 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC15.67■□□□□ 0.1
HIST3H2BBQ8N257 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HIST3H2BBQ8N257 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HIST3H2BBQ8N257 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC15.67■□□□□ 0.1
HIST3H2BBQ8N257 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC15.67■□□□□ 0.1
HIST3H2BBQ8N257 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HIST3H2BBQ8N257 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HIST3H2BBQ8N257 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HIST3H2BBQ8N257 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HIST3H2BBQ8N257 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HIST3H2BBQ8N257 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC15.66■□□□□ 0.1
HIST3H2BBQ8N257 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
HIST3H2BBQ8N257 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
HIST3H2BBQ8N257 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
HIST3H2BBQ8N257 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HIST3H2BBQ8N257 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
HIST3H2BBQ8N257 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HIST3H2BBQ8N257 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HIST3H2BBQ8N257 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HIST3H2BBQ8N257 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
HIST3H2BBQ8N257 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HIST3H2BBQ8N257 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HIST3H2BBQ8N257 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
HIST3H2BBQ8N257 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
HIST3H2BBQ8N257 AC079598.2-202ENST00000546624 1451 ntBASIC15.65■□□□□ 0.1
HIST3H2BBQ8N257 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HIST3H2BBQ8N257 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.65■□□□□ 0.1
HIST3H2BBQ8N257 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HIST3H2BBQ8N257 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
HIST3H2BBQ8N257 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HIST3H2BBQ8N257 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HIST3H2BBQ8N257 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
HIST3H2BBQ8N257 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
HIST3H2BBQ8N257 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HIST3H2BBQ8N257 AC106820.2-201ENST00000563775 3264 ntBASIC15.65■□□□□ 0.1
HIST3H2BBQ8N257 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC15.65■□□□□ 0.1
HIST3H2BBQ8N257 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
HIST3H2BBQ8N257 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC15.65■□□□□ 0.1
HIST3H2BBQ8N257 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
HIST3H2BBQ8N257 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
HIST3H2BBQ8N257 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HIST3H2BBQ8N257 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC15.65■□□□□ 0.1
HIST3H2BBQ8N257 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
HIST3H2BBQ8N257 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
HIST3H2BBQ8N257 AC104564.3-201ENST00000582367 638 ntBASIC15.65■□□□□ 0.1
HIST3H2BBQ8N257 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC15.65■□□□□ 0.1
HIST3H2BBQ8N257 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
HIST3H2BBQ8N257 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
HIST3H2BBQ8N257 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
HIST3H2BBQ8N257 PARN-205ENST00000539279 1557 ntTSL 2 BASIC15.65■□□□□ 0.1
HIST3H2BBQ8N257 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HIST3H2BBQ8N257 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HIST3H2BBQ8N257 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC15.65■□□□□ 0.1
HIST3H2BBQ8N257 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
HIST3H2BBQ8N257 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HIST3H2BBQ8N257 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC15.64■□□□□ 0.1
HIST3H2BBQ8N257 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HIST3H2BBQ8N257 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC15.64■□□□□ 0.09
HIST3H2BBQ8N257 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HIST3H2BBQ8N257 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HIST3H2BBQ8N257 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HIST3H2BBQ8N257 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
HIST3H2BBQ8N257 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HIST3H2BBQ8N257 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC15.64■□□□□ 0.09
HIST3H2BBQ8N257 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC15.64■□□□□ 0.09
HIST3H2BBQ8N257 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
HIST3H2BBQ8N257 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms