Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
ARHGEF28Q8N1W1 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC29.25■■■□□ 2.27
ARHGEF28Q8N1W1 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC29.25■■■□□ 2.27
ARHGEF28Q8N1W1 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
ARHGEF28Q8N1W1 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
ARHGEF28Q8N1W1 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC29.25■■■□□ 2.27
ARHGEF28Q8N1W1 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
ARHGEF28Q8N1W1 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
ARHGEF28Q8N1W1 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC29.24■■■□□ 2.27
ARHGEF28Q8N1W1 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
ARHGEF28Q8N1W1 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC29.24■■■□□ 2.27
ARHGEF28Q8N1W1 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC29.24■■■□□ 2.27
ARHGEF28Q8N1W1 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC29.24■■■□□ 2.27
ARHGEF28Q8N1W1 AC100791.3-201ENST00000617619 330 ntBASIC29.24■■■□□ 2.27
ARHGEF28Q8N1W1 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC29.24■■■□□ 2.27
ARHGEF28Q8N1W1 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
ARHGEF28Q8N1W1 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
ARHGEF28Q8N1W1 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC29.23■■■□□ 2.27
ARHGEF28Q8N1W1 AP003097.1-201ENST00000530657 1135 ntBASIC29.23■■■□□ 2.27
ARHGEF28Q8N1W1 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC29.23■■■□□ 2.27
ARHGEF28Q8N1W1 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC29.23■■■□□ 2.27
ARHGEF28Q8N1W1 AC060766.5-201ENST00000590539 871 ntBASIC29.23■■■□□ 2.27
ARHGEF28Q8N1W1 AC242852.2-201ENST00000615738 1807 ntBASIC29.23■■■□□ 2.27
ARHGEF28Q8N1W1 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
ARHGEF28Q8N1W1 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC29.23■■■□□ 2.27
ARHGEF28Q8N1W1 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
ARHGEF28Q8N1W1 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
ARHGEF28Q8N1W1 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC29.23■■■□□ 2.27
ARHGEF28Q8N1W1 DET1-205ENST00000558413 583 ntTSL 4 BASIC29.23■■■□□ 2.27
ARHGEF28Q8N1W1 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC29.22■■■□□ 2.27
ARHGEF28Q8N1W1 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
ARHGEF28Q8N1W1 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC29.22■■■□□ 2.27
ARHGEF28Q8N1W1 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC29.22■■■□□ 2.27
ARHGEF28Q8N1W1 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC29.22■■■□□ 2.27
ARHGEF28Q8N1W1 SAPCD2P1-201ENST00000395413 1184 ntBASIC29.22■■■□□ 2.27
ARHGEF28Q8N1W1 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC29.22■■■□□ 2.27
ARHGEF28Q8N1W1 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC29.22■■■□□ 2.27
ARHGEF28Q8N1W1 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC29.22■■■□□ 2.27
ARHGEF28Q8N1W1 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC29.22■■■□□ 2.27
ARHGEF28Q8N1W1 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
ARHGEF28Q8N1W1 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
ARHGEF28Q8N1W1 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC29.21■■■□□ 2.27
ARHGEF28Q8N1W1 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC29.21■■■□□ 2.27
ARHGEF28Q8N1W1 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC29.21■■■□□ 2.27
ARHGEF28Q8N1W1 AC008403.3-201ENST00000598924 454 ntBASIC29.21■■■□□ 2.27
ARHGEF28Q8N1W1 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
ARHGEF28Q8N1W1 VMO1-204ENST00000441199 741 ntTSL 2 BASIC29.2■■■□□ 2.27
ARHGEF28Q8N1W1 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
ARHGEF28Q8N1W1 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
ARHGEF28Q8N1W1 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
ARHGEF28Q8N1W1 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
ARHGEF28Q8N1W1 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
ARHGEF28Q8N1W1 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
ARHGEF28Q8N1W1 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC29.2■■■□□ 2.26
ARHGEF28Q8N1W1 CDV3P1-201ENST00000471403 739 ntBASIC29.2■■■□□ 2.26
ARHGEF28Q8N1W1 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC29.2■■■□□ 2.26
ARHGEF28Q8N1W1 AC105020.6-201ENST00000621523 1217 ntBASIC29.2■■■□□ 2.26
ARHGEF28Q8N1W1 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
ARHGEF28Q8N1W1 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC29.19■■■□□ 2.26
ARHGEF28Q8N1W1 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
ARHGEF28Q8N1W1 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC29.19■■■□□ 2.26
ARHGEF28Q8N1W1 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
ARHGEF28Q8N1W1 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
ARHGEF28Q8N1W1 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC29.19■■■□□ 2.26
ARHGEF28Q8N1W1 GCSHP5-201ENST00000443090 522 ntBASIC29.19■■■□□ 2.26
ARHGEF28Q8N1W1 GATS-209ENST00000454084 1030 ntTSL 3 BASIC29.19■■■□□ 2.26
ARHGEF28Q8N1W1 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC29.19■■■□□ 2.26
ARHGEF28Q8N1W1 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC29.18■■■□□ 2.26
ARHGEF28Q8N1W1 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC29.18■■■□□ 2.26
ARHGEF28Q8N1W1 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC29.18■■■□□ 2.26
ARHGEF28Q8N1W1 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
ARHGEF28Q8N1W1 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
ARHGEF28Q8N1W1 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC29.18■■■□□ 2.26
ARHGEF28Q8N1W1 MCRIP2P1-201ENST00000394346 511 ntBASIC29.18■■■□□ 2.26
ARHGEF28Q8N1W1 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC29.18■■■□□ 2.26
ARHGEF28Q8N1W1 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC29.18■■■□□ 2.26
ARHGEF28Q8N1W1 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC29.18■■■□□ 2.26
ARHGEF28Q8N1W1 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
ARHGEF28Q8N1W1 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC29.18■■■□□ 2.26
ARHGEF28Q8N1W1 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
ARHGEF28Q8N1W1 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC29.18■■■□□ 2.26
ARHGEF28Q8N1W1 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC29.18■■■□□ 2.26
ARHGEF28Q8N1W1 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC29.17■■■□□ 2.26
ARHGEF28Q8N1W1 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC29.17■■■□□ 2.26
ARHGEF28Q8N1W1 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC29.17■■■□□ 2.26
ARHGEF28Q8N1W1 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC29.17■■■□□ 2.26
ARHGEF28Q8N1W1 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC29.17■■■□□ 2.26
ARHGEF28Q8N1W1 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC29.17■■■□□ 2.26
ARHGEF28Q8N1W1 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC29.17■■■□□ 2.26
ARHGEF28Q8N1W1 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC29.17■■■□□ 2.26
ARHGEF28Q8N1W1 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
ARHGEF28Q8N1W1 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC29.17■■■□□ 2.26
ARHGEF28Q8N1W1 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
ARHGEF28Q8N1W1 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
ARHGEF28Q8N1W1 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
ARHGEF28Q8N1W1 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC29.17■■■□□ 2.26
ARHGEF28Q8N1W1 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC29.17■■■□□ 2.26
ARHGEF28Q8N1W1 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC29.17■■■□□ 2.26
ARHGEF28Q8N1W1 KLF2-202ENST00000592003 564 ntTSL 3 BASIC29.17■■■□□ 2.26
ARHGEF28Q8N1W1 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms