Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC30.16■■■□□ 2.42
UBR1Q8IWV7 GCK-205ENST00000437084 1385 ntTSL 5 BASIC30.16■■■□□ 2.42
UBR1Q8IWV7 AC003102.1-202ENST00000563394 1796 ntBASIC30.16■■■□□ 2.42
UBR1Q8IWV7 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
UBR1Q8IWV7 AC139530.1-201ENST00000575312 1977 ntBASIC30.16■■■□□ 2.42
UBR1Q8IWV7 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
UBR1Q8IWV7 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
UBR1Q8IWV7 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC30.16■■■□□ 2.42
UBR1Q8IWV7 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
UBR1Q8IWV7 SERF2-207ENST00000409614 582 ntTSL 2 BASIC30.16■■■□□ 2.42
UBR1Q8IWV7 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
UBR1Q8IWV7 AC245052.3-201ENST00000450182 901 ntBASIC30.16■■■□□ 2.42
UBR1Q8IWV7 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
UBR1Q8IWV7 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC30.16■■■□□ 2.42
UBR1Q8IWV7 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
UBR1Q8IWV7 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC30.16■■■□□ 2.42
UBR1Q8IWV7 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
UBR1Q8IWV7 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC30.15■■■□□ 2.42
UBR1Q8IWV7 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC30.15■■■□□ 2.42
UBR1Q8IWV7 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC30.15■■■□□ 2.42
UBR1Q8IWV7 ABHD17AP6-201ENST00000458502 1044 ntBASIC30.15■■■□□ 2.42
UBR1Q8IWV7 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
UBR1Q8IWV7 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
UBR1Q8IWV7 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC30.15■■■□□ 2.42
UBR1Q8IWV7 AL355075.4-201ENST00000554988 638 ntBASIC30.15■■■□□ 2.42
UBR1Q8IWV7 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC30.15■■■□□ 2.42
UBR1Q8IWV7 AC012306.2-201ENST00000609350 630 ntBASIC30.15■■■□□ 2.42
UBR1Q8IWV7 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC30.15■■■□□ 2.42
UBR1Q8IWV7 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
UBR1Q8IWV7 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
UBR1Q8IWV7 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
UBR1Q8IWV7 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC30.14■■■□□ 2.42
UBR1Q8IWV7 RCN1P1-201ENST00000400413 996 ntBASIC30.14■■■□□ 2.42
UBR1Q8IWV7 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
UBR1Q8IWV7 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC30.14■■■□□ 2.42
UBR1Q8IWV7 PPOX-219ENST00000544598 813 ntTSL 2 BASIC30.14■■■□□ 2.42
UBR1Q8IWV7 AC124016.1-201ENST00000609552 612 ntBASIC30.14■■■□□ 2.42
UBR1Q8IWV7 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC30.14■■■□□ 2.42
UBR1Q8IWV7 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
UBR1Q8IWV7 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC30.14■■■□□ 2.42
UBR1Q8IWV7 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC30.14■■■□□ 2.42
UBR1Q8IWV7 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC30.14■■■□□ 2.41
UBR1Q8IWV7 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC30.14■■■□□ 2.41
UBR1Q8IWV7 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
UBR1Q8IWV7 AC007322.3-201ENST00000426526 701 ntBASIC30.13■■■□□ 2.41
UBR1Q8IWV7 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
UBR1Q8IWV7 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
UBR1Q8IWV7 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC30.13■■■□□ 2.41
UBR1Q8IWV7 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
UBR1Q8IWV7 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
UBR1Q8IWV7 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
UBR1Q8IWV7 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
UBR1Q8IWV7 SAPCD2P1-201ENST00000395413 1184 ntBASIC30.13■■■□□ 2.41
UBR1Q8IWV7 AC087499.1-201ENST00000418141 1075 ntBASIC30.13■■■□□ 2.41
UBR1Q8IWV7 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC30.13■■■□□ 2.41
UBR1Q8IWV7 REXO2-208ENST00000539754 791 ntTSL 2 BASIC30.13■■■□□ 2.41
UBR1Q8IWV7 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC30.13■■■□□ 2.41
UBR1Q8IWV7 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC30.12■■■□□ 2.41
UBR1Q8IWV7 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
UBR1Q8IWV7 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC30.12■■■□□ 2.41
UBR1Q8IWV7 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC30.12■■■□□ 2.41
UBR1Q8IWV7 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC30.12■■■□□ 2.41
UBR1Q8IWV7 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
UBR1Q8IWV7 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC30.12■■■□□ 2.41
UBR1Q8IWV7 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC30.12■■■□□ 2.41
UBR1Q8IWV7 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
UBR1Q8IWV7 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
UBR1Q8IWV7 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
UBR1Q8IWV7 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
UBR1Q8IWV7 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC30.11■■■□□ 2.41
UBR1Q8IWV7 AL049637.2-201ENST00000641778 930 ntBASIC30.11■■■□□ 2.41
UBR1Q8IWV7 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
UBR1Q8IWV7 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC30.11■■■□□ 2.41
UBR1Q8IWV7 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
UBR1Q8IWV7 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
UBR1Q8IWV7 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
UBR1Q8IWV7 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
UBR1Q8IWV7 AC133681.1-201ENST00000465482 601 ntBASIC30.1■■■□□ 2.41
UBR1Q8IWV7 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
UBR1Q8IWV7 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
UBR1Q8IWV7 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
UBR1Q8IWV7 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
UBR1Q8IWV7 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
UBR1Q8IWV7 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC30.1■■■□□ 2.41
UBR1Q8IWV7 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
UBR1Q8IWV7 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC30.1■■■□□ 2.41
UBR1Q8IWV7 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
UBR1Q8IWV7 CRK-204ENST00000574295 1391 ntTSL 5 BASIC30.09■■■□□ 2.41
UBR1Q8IWV7 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC30.09■■■□□ 2.41
UBR1Q8IWV7 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC30.09■■■□□ 2.41
UBR1Q8IWV7 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC30.09■■■□□ 2.41
UBR1Q8IWV7 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
UBR1Q8IWV7 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC30.09■■■□□ 2.41
UBR1Q8IWV7 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC30.09■■■□□ 2.41
UBR1Q8IWV7 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC30.09■■■□□ 2.41
UBR1Q8IWV7 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC30.09■■■□□ 2.41
UBR1Q8IWV7 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC30.09■■■□□ 2.41
UBR1Q8IWV7 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
UBR1Q8IWV7 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
UBR1Q8IWV7 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC30.08■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms