Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RTL4Q6ZR62 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.53■□□□□ 0.72
RTL4Q6ZR62 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTL4Q6ZR62 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTL4Q6ZR62 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTL4Q6ZR62 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTL4Q6ZR62 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.53■□□□□ 0.72
RTL4Q6ZR62 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.53■□□□□ 0.72
RTL4Q6ZR62 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.53■□□□□ 0.72
RTL4Q6ZR62 AP001160.3-201ENST00000601484 763 ntBASIC19.53■□□□□ 0.72
RTL4Q6ZR62 RARRES2P11-201ENST00000635158 484 ntBASIC19.53■□□□□ 0.72
RTL4Q6ZR62 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTL4Q6ZR62 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTL4Q6ZR62 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RTL4Q6ZR62 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTL4Q6ZR62 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
RTL4Q6ZR62 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTL4Q6ZR62 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTL4Q6ZR62 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RTL4Q6ZR62 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RTL4Q6ZR62 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RTL4Q6ZR62 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.52■□□□□ 0.72
RTL4Q6ZR62 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RTL4Q6ZR62 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.52■□□□□ 0.72
RTL4Q6ZR62 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RTL4Q6ZR62 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RTL4Q6ZR62 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RTL4Q6ZR62 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RTL4Q6ZR62 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RTL4Q6ZR62 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RTL4Q6ZR62 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.52■□□□□ 0.72
RTL4Q6ZR62 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RTL4Q6ZR62 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.52■□□□□ 0.72
RTL4Q6ZR62 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.52■□□□□ 0.72
RTL4Q6ZR62 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
RTL4Q6ZR62 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
RTL4Q6ZR62 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.52■□□□□ 0.71
RTL4Q6ZR62 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.52■□□□□ 0.71
RTL4Q6ZR62 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTL4Q6ZR62 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTL4Q6ZR62 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
RTL4Q6ZR62 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTL4Q6ZR62 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.51■□□□□ 0.71
RTL4Q6ZR62 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RTL4Q6ZR62 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTL4Q6ZR62 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
RTL4Q6ZR62 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RTL4Q6ZR62 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTL4Q6ZR62 EEF1DP3-203ENST00000566025 782 ntBASIC19.51■□□□□ 0.71
RTL4Q6ZR62 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.51■□□□□ 0.71
RTL4Q6ZR62 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.51■□□□□ 0.71
RTL4Q6ZR62 AC138907.5-202ENST00000569484 235 ntBASIC19.51■□□□□ 0.71
RTL4Q6ZR62 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTL4Q6ZR62 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RTL4Q6ZR62 AC053503.5-201ENST00000601508 636 ntBASIC19.51■□□□□ 0.71
RTL4Q6ZR62 BID-214ENST00000617586 542 ntTSL 5 BASIC19.51■□□□□ 0.71
RTL4Q6ZR62 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
RTL4Q6ZR62 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.51■□□□□ 0.71
RTL4Q6ZR62 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.51■□□□□ 0.71
RTL4Q6ZR62 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
RTL4Q6ZR62 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTL4Q6ZR62 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTL4Q6ZR62 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTL4Q6ZR62 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTL4Q6ZR62 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTL4Q6ZR62 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTL4Q6ZR62 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTL4Q6ZR62 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
RTL4Q6ZR62 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.5■□□□□ 0.71
RTL4Q6ZR62 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.5■□□□□ 0.71
RTL4Q6ZR62 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
RTL4Q6ZR62 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RTL4Q6ZR62 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.5■□□□□ 0.71
RTL4Q6ZR62 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RTL4Q6ZR62 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
RTL4Q6ZR62 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.5■□□□□ 0.71
RTL4Q6ZR62 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.5■□□□□ 0.71
RTL4Q6ZR62 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RTL4Q6ZR62 AC010141.2-201ENST00000452426 721 ntBASIC19.5■□□□□ 0.71
RTL4Q6ZR62 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.5■□□□□ 0.71
RTL4Q6ZR62 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RTL4Q6ZR62 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.5■□□□□ 0.71
RTL4Q6ZR62 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.5■□□□□ 0.71
RTL4Q6ZR62 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RTL4Q6ZR62 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RTL4Q6ZR62 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RTL4Q6ZR62 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTL4Q6ZR62 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RTL4Q6ZR62 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTL4Q6ZR62 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
RTL4Q6ZR62 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
RTL4Q6ZR62 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.49■□□□□ 0.71
RTL4Q6ZR62 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RTL4Q6ZR62 AC090192.1-201ENST00000517740 490 ntBASIC19.49■□□□□ 0.71
RTL4Q6ZR62 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
RTL4Q6ZR62 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.49■□□□□ 0.71
RTL4Q6ZR62 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.49■□□□□ 0.71
RTL4Q6ZR62 AC080038.1-201ENST00000611274 1154 ntBASIC19.49■□□□□ 0.71
RTL4Q6ZR62 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
RTL4Q6ZR62 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms