Protein–RNA interactions for Protein: Q6YHK3

CD109, CD109 antigen, humanhuman

Predictions only

Length 1,445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD109Q6YHK3 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC32.28■■■□□ 2.76
CD109Q6YHK3 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
CD109Q6YHK3 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
CD109Q6YHK3 KRT18P68-201ENST00000392293 1000 ntBASIC32.27■■■□□ 2.76
CD109Q6YHK3 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
CD109Q6YHK3 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC32.27■■■□□ 2.76
CD109Q6YHK3 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC32.27■■■□□ 2.76
CD109Q6YHK3 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC32.27■■■□□ 2.76
CD109Q6YHK3 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC32.26■■■□□ 2.76
CD109Q6YHK3 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC32.26■■■□□ 2.76
CD109Q6YHK3 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
CD109Q6YHK3 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC32.26■■■□□ 2.76
CD109Q6YHK3 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC32.26■■■□□ 2.76
CD109Q6YHK3 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC32.26■■■□□ 2.75
CD109Q6YHK3 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC32.26■■■□□ 2.75
CD109Q6YHK3 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC32.26■■■□□ 2.75
CD109Q6YHK3 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC32.26■■■□□ 2.75
CD109Q6YHK3 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
CD109Q6YHK3 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
CD109Q6YHK3 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
CD109Q6YHK3 VMO1-204ENST00000441199 741 ntTSL 2 BASIC32.25■■■□□ 2.75
CD109Q6YHK3 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC32.25■■■□□ 2.75
CD109Q6YHK3 C2orf69P4-201ENST00000565394 541 ntBASIC32.25■■■□□ 2.75
CD109Q6YHK3 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
CD109Q6YHK3 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC32.24■■■□□ 2.75
CD109Q6YHK3 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC32.24■■■□□ 2.75
CD109Q6YHK3 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
CD109Q6YHK3 AL135905.2-201ENST00000584934 1404 ntBASIC32.24■■■□□ 2.75
CD109Q6YHK3 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC32.24■■■□□ 2.75
CD109Q6YHK3 NT5C-211ENST00000582170 653 ntTSL 3 BASIC32.24■■■□□ 2.75
CD109Q6YHK3 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC32.24■■■□□ 2.75
CD109Q6YHK3 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC32.24■■■□□ 2.75
CD109Q6YHK3 ANOS2P-203ENST00000472227 1816 ntBASIC32.24■■■□□ 2.75
CD109Q6YHK3 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC32.24■■■□□ 2.75
CD109Q6YHK3 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
CD109Q6YHK3 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC32.23■■■□□ 2.75
CD109Q6YHK3 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
CD109Q6YHK3 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
CD109Q6YHK3 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC32.23■■■□□ 2.75
CD109Q6YHK3 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
CD109Q6YHK3 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC32.23■■■□□ 2.75
CD109Q6YHK3 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
CD109Q6YHK3 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
CD109Q6YHK3 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
CD109Q6YHK3 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC32.23■■■□□ 2.75
CD109Q6YHK3 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC32.23■■■□□ 2.75
CD109Q6YHK3 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC32.23■■■□□ 2.75
CD109Q6YHK3 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC32.22■■■□□ 2.75
CD109Q6YHK3 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
CD109Q6YHK3 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC32.22■■■□□ 2.75
CD109Q6YHK3 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC32.22■■■□□ 2.75
CD109Q6YHK3 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC32.22■■■□□ 2.75
CD109Q6YHK3 AL023875.1-201ENST00000640777 796 ntBASIC32.22■■■□□ 2.75
CD109Q6YHK3 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC32.22■■■□□ 2.75
CD109Q6YHK3 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
CD109Q6YHK3 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
CD109Q6YHK3 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
CD109Q6YHK3 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC32.21■■■□□ 2.75
CD109Q6YHK3 AL353708.3-201ENST00000610272 989 ntBASIC32.21■■■□□ 2.75
CD109Q6YHK3 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
CD109Q6YHK3 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
CD109Q6YHK3 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC32.2■■■□□ 2.75
CD109Q6YHK3 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC32.2■■■□□ 2.75
CD109Q6YHK3 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC32.2■■■□□ 2.75
CD109Q6YHK3 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
CD109Q6YHK3 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
CD109Q6YHK3 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC32.2■■■□□ 2.75
CD109Q6YHK3 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
CD109Q6YHK3 AC239809.2-201ENST00000415381 517 ntBASIC32.2■■■□□ 2.75
CD109Q6YHK3 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC32.2■■■□□ 2.75
CD109Q6YHK3 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC32.2■■■□□ 2.75
CD109Q6YHK3 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
CD109Q6YHK3 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC32.2■■■□□ 2.75
CD109Q6YHK3 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.74
CD109Q6YHK3 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC32.2■■■□□ 2.74
CD109Q6YHK3 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.74
CD109Q6YHK3 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC32.2■■■□□ 2.74
CD109Q6YHK3 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
CD109Q6YHK3 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC32.19■■■□□ 2.74
CD109Q6YHK3 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
CD109Q6YHK3 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
CD109Q6YHK3 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
CD109Q6YHK3 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
CD109Q6YHK3 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC32.19■■■□□ 2.74
CD109Q6YHK3 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
CD109Q6YHK3 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC32.18■■■□□ 2.74
CD109Q6YHK3 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC32.18■■■□□ 2.74
CD109Q6YHK3 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC32.18■■■□□ 2.74
CD109Q6YHK3 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
CD109Q6YHK3 NXN-202ENST00000537628 1340 ntTSL 3 BASIC32.18■■■□□ 2.74
CD109Q6YHK3 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
CD109Q6YHK3 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
CD109Q6YHK3 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC32.18■■■□□ 2.74
CD109Q6YHK3 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
CD109Q6YHK3 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
CD109Q6YHK3 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC32.17■■■□□ 2.74
CD109Q6YHK3 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC32.17■■■□□ 2.74
CD109Q6YHK3 AC245052.3-201ENST00000450182 901 ntBASIC32.17■■■□□ 2.74
CD109Q6YHK3 HES2-205ENST00000487437 968 ntTSL 3 BASIC32.17■■■□□ 2.74
CD109Q6YHK3 PENK-204ENST00000518770 863 ntTSL 2 BASIC32.17■■■□□ 2.74
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms