Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC32■■■□□ 2.71
CDC42BPAQ5VT25 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
CDC42BPAQ5VT25 AC092053.2-201ENST00000640557 1818 ntBASIC32■■■□□ 2.71
CDC42BPAQ5VT25 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC32■■■□□ 2.71
CDC42BPAQ5VT25 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
CDC42BPAQ5VT25 SAPCD2P1-201ENST00000395413 1184 ntBASIC32■■■□□ 2.71
CDC42BPAQ5VT25 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC32■■■□□ 2.71
CDC42BPAQ5VT25 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC32■■■□□ 2.71
CDC42BPAQ5VT25 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC32■■■□□ 2.71
CDC42BPAQ5VT25 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
CDC42BPAQ5VT25 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
CDC42BPAQ5VT25 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC31.99■■■□□ 2.71
CDC42BPAQ5VT25 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
CDC42BPAQ5VT25 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
CDC42BPAQ5VT25 MME-217ENST00000616757 1315 ntTSL 5 BASIC31.99■■■□□ 2.71
CDC42BPAQ5VT25 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC31.99■■■□□ 2.71
CDC42BPAQ5VT25 BAALC-201ENST00000297574 801 ntTSL 3 BASIC31.99■■■□□ 2.71
CDC42BPAQ5VT25 CDV3P1-201ENST00000471403 739 ntBASIC31.99■■■□□ 2.71
CDC42BPAQ5VT25 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC31.99■■■□□ 2.71
CDC42BPAQ5VT25 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
CDC42BPAQ5VT25 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC31.99■■■□□ 2.71
CDC42BPAQ5VT25 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC31.98■■■□□ 2.71
CDC42BPAQ5VT25 PEX7-202ENST00000367756 680 ntTSL 3 BASIC31.98■■■□□ 2.71
CDC42BPAQ5VT25 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC31.98■■■□□ 2.71
CDC42BPAQ5VT25 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC31.98■■■□□ 2.71
CDC42BPAQ5VT25 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
CDC42BPAQ5VT25 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
CDC42BPAQ5VT25 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
CDC42BPAQ5VT25 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
CDC42BPAQ5VT25 RPS2P4-201ENST00000476944 856 ntBASIC31.97■■■□□ 2.71
CDC42BPAQ5VT25 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
CDC42BPAQ5VT25 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC31.97■■■□□ 2.71
CDC42BPAQ5VT25 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC31.97■■■□□ 2.71
CDC42BPAQ5VT25 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC31.97■■■□□ 2.71
CDC42BPAQ5VT25 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC31.97■■■□□ 2.71
CDC42BPAQ5VT25 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC31.97■■■□□ 2.71
CDC42BPAQ5VT25 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC31.97■■■□□ 2.71
CDC42BPAQ5VT25 AC092368.3-202ENST00000574180 1591 ntBASIC31.97■■■□□ 2.71
CDC42BPAQ5VT25 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC31.97■■■□□ 2.71
CDC42BPAQ5VT25 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC31.97■■■□□ 2.71
CDC42BPAQ5VT25 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
CDC42BPAQ5VT25 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC31.97■■■□□ 2.71
CDC42BPAQ5VT25 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC31.97■■■□□ 2.71
CDC42BPAQ5VT25 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC31.97■■■□□ 2.71
CDC42BPAQ5VT25 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
CDC42BPAQ5VT25 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC31.97■■■□□ 2.71
CDC42BPAQ5VT25 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC31.97■■■□□ 2.71
CDC42BPAQ5VT25 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC31.97■■■□□ 2.71
CDC42BPAQ5VT25 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
CDC42BPAQ5VT25 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC31.95■■■□□ 2.71
CDC42BPAQ5VT25 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
CDC42BPAQ5VT25 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC31.95■■■□□ 2.71
CDC42BPAQ5VT25 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
CDC42BPAQ5VT25 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC31.95■■■□□ 2.71
CDC42BPAQ5VT25 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC31.95■■■□□ 2.71
CDC42BPAQ5VT25 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
CDC42BPAQ5VT25 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC31.95■■■□□ 2.71
CDC42BPAQ5VT25 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC31.95■■■□□ 2.71
CDC42BPAQ5VT25 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC31.95■■■□□ 2.7
CDC42BPAQ5VT25 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC31.94■■■□□ 2.7
CDC42BPAQ5VT25 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC31.94■■■□□ 2.7
CDC42BPAQ5VT25 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
CDC42BPAQ5VT25 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC31.94■■■□□ 2.7
CDC42BPAQ5VT25 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC31.93■■■□□ 2.7
CDC42BPAQ5VT25 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC31.93■■■□□ 2.7
CDC42BPAQ5VT25 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC31.93■■■□□ 2.7
CDC42BPAQ5VT25 GCK-205ENST00000437084 1385 ntTSL 5 BASIC31.93■■■□□ 2.7
CDC42BPAQ5VT25 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CDC42BPAQ5VT25 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC31.93■■■□□ 2.7
CDC42BPAQ5VT25 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC31.93■■■□□ 2.7
CDC42BPAQ5VT25 AL589743.5-201ENST00000616611 1050 ntBASIC31.93■■■□□ 2.7
CDC42BPAQ5VT25 NARF-205ENST00000412079 1760 ntTSL 5 BASIC31.93■■■□□ 2.7
CDC42BPAQ5VT25 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC31.93■■■□□ 2.7
CDC42BPAQ5VT25 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CDC42BPAQ5VT25 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC31.93■■■□□ 2.7
CDC42BPAQ5VT25 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
CDC42BPAQ5VT25 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
CDC42BPAQ5VT25 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
CDC42BPAQ5VT25 CYP21A1P-202ENST00000354927 1481 ntBASIC31.92■■■□□ 2.7
CDC42BPAQ5VT25 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
CDC42BPAQ5VT25 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC31.92■■■□□ 2.7
CDC42BPAQ5VT25 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
CDC42BPAQ5VT25 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC31.92■■■□□ 2.7
CDC42BPAQ5VT25 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
CDC42BPAQ5VT25 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
CDC42BPAQ5VT25 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
CDC42BPAQ5VT25 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC31.92■■■□□ 2.7
CDC42BPAQ5VT25 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
CDC42BPAQ5VT25 SOX15-203ENST00000570788 1093 ntBASIC31.92■■■□□ 2.7
CDC42BPAQ5VT25 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC31.92■■■□□ 2.7
CDC42BPAQ5VT25 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CDC42BPAQ5VT25 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CDC42BPAQ5VT25 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
CDC42BPAQ5VT25 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC31.91■■■□□ 2.7
CDC42BPAQ5VT25 UBE2SP1-201ENST00000450587 669 ntBASIC31.91■■■□□ 2.7
CDC42BPAQ5VT25 C1QBPP2-201ENST00000528754 825 ntBASIC31.91■■■□□ 2.7
CDC42BPAQ5VT25 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC31.91■■■□□ 2.7
CDC42BPAQ5VT25 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CDC42BPAQ5VT25 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CDC42BPAQ5VT25 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms