Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC093323.1-202ENST00000635031 2045 ntBASIC26.61■■□□□ 1.85
RC3H1Q5TC82 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC26.61■■□□□ 1.85
RC3H1Q5TC82 AC092053.2-201ENST00000640557 1818 ntBASIC26.61■■□□□ 1.85
RC3H1Q5TC82 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
RC3H1Q5TC82 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
RC3H1Q5TC82 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
RC3H1Q5TC82 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC26.61■■□□□ 1.85
RC3H1Q5TC82 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
RC3H1Q5TC82 OR2A1-AS1-207ENST00000486094 819 ntBASIC26.61■■□□□ 1.85
RC3H1Q5TC82 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC26.61■■□□□ 1.85
RC3H1Q5TC82 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC26.61■■□□□ 1.85
RC3H1Q5TC82 NXN-202ENST00000537628 1340 ntTSL 3 BASIC26.61■■□□□ 1.85
RC3H1Q5TC82 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC26.61■■□□□ 1.85
RC3H1Q5TC82 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC26.61■■□□□ 1.85
RC3H1Q5TC82 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
RC3H1Q5TC82 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
RC3H1Q5TC82 MFF-205ENST00000354503 1085 ntTSL 2 BASIC26.6■■□□□ 1.85
RC3H1Q5TC82 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC26.6■■□□□ 1.85
RC3H1Q5TC82 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
RC3H1Q5TC82 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC26.6■■□□□ 1.85
RC3H1Q5TC82 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
RC3H1Q5TC82 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC26.6■■□□□ 1.85
RC3H1Q5TC82 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC26.6■■□□□ 1.85
RC3H1Q5TC82 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
RC3H1Q5TC82 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
RC3H1Q5TC82 SPIB-206ENST00000596074 847 ntTSL 2 BASIC26.6■■□□□ 1.85
RC3H1Q5TC82 AC069544.1-201ENST00000609399 999 ntBASIC26.6■■□□□ 1.85
RC3H1Q5TC82 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC26.6■■□□□ 1.85
RC3H1Q5TC82 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC26.6■■□□□ 1.85
RC3H1Q5TC82 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC26.6■■□□□ 1.85
RC3H1Q5TC82 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC26.59■■□□□ 1.85
RC3H1Q5TC82 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
RC3H1Q5TC82 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC26.59■■□□□ 1.85
RC3H1Q5TC82 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
RC3H1Q5TC82 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
RC3H1Q5TC82 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC26.59■■□□□ 1.85
RC3H1Q5TC82 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
RC3H1Q5TC82 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
RC3H1Q5TC82 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
RC3H1Q5TC82 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC26.59■■□□□ 1.85
RC3H1Q5TC82 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC26.59■■□□□ 1.85
RC3H1Q5TC82 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
RC3H1Q5TC82 REXO2-208ENST00000539754 791 ntTSL 2 BASIC26.59■■□□□ 1.85
RC3H1Q5TC82 SOX15-203ENST00000570788 1093 ntBASIC26.59■■□□□ 1.85
RC3H1Q5TC82 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC26.59■■□□□ 1.85
RC3H1Q5TC82 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
RC3H1Q5TC82 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC26.58■■□□□ 1.85
RC3H1Q5TC82 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
RC3H1Q5TC82 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
RC3H1Q5TC82 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
RC3H1Q5TC82 ECEL1P3-201ENST00000427961 737 ntBASIC26.58■■□□□ 1.85
RC3H1Q5TC82 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
RC3H1Q5TC82 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC26.58■■□□□ 1.85
RC3H1Q5TC82 NFE2L3P1-201ENST00000588207 1959 ntBASIC26.58■■□□□ 1.85
RC3H1Q5TC82 LTK-203ENST00000453182 2412 ntTSL 2 BASIC26.58■■□□□ 1.85
RC3H1Q5TC82 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC26.58■■□□□ 1.85
RC3H1Q5TC82 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC26.58■■□□□ 1.85
RC3H1Q5TC82 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.84
RC3H1Q5TC82 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.84
RC3H1Q5TC82 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC26.57■■□□□ 1.84
RC3H1Q5TC82 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC26.57■■□□□ 1.84
RC3H1Q5TC82 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
RC3H1Q5TC82 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC26.57■■□□□ 1.84
RC3H1Q5TC82 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RC3H1Q5TC82 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RC3H1Q5TC82 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
RC3H1Q5TC82 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC26.57■■□□□ 1.84
RC3H1Q5TC82 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
RC3H1Q5TC82 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
RC3H1Q5TC82 REXO1L12P-201ENST00000622156 912 ntBASIC26.57■■□□□ 1.84
RC3H1Q5TC82 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC26.57■■□□□ 1.84
RC3H1Q5TC82 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RC3H1Q5TC82 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RC3H1Q5TC82 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC26.57■■□□□ 1.84
RC3H1Q5TC82 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
RC3H1Q5TC82 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
RC3H1Q5TC82 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
RC3H1Q5TC82 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC26.56■■□□□ 1.84
RC3H1Q5TC82 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC26.56■■□□□ 1.84
RC3H1Q5TC82 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
RC3H1Q5TC82 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
RC3H1Q5TC82 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
RC3H1Q5TC82 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC26.56■■□□□ 1.84
RC3H1Q5TC82 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
RC3H1Q5TC82 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC26.56■■□□□ 1.84
RC3H1Q5TC82 AC211429.1-201ENST00000415277 523 ntBASIC26.56■■□□□ 1.84
RC3H1Q5TC82 AC007322.3-201ENST00000426526 701 ntBASIC26.56■■□□□ 1.84
RC3H1Q5TC82 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC26.56■■□□□ 1.84
RC3H1Q5TC82 SNORA78-201ENST00000459373 127 ntBASIC26.56■■□□□ 1.84
RC3H1Q5TC82 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC26.56■■□□□ 1.84
RC3H1Q5TC82 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
RC3H1Q5TC82 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
RC3H1Q5TC82 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
RC3H1Q5TC82 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC26.56■■□□□ 1.84
RC3H1Q5TC82 CRK-204ENST00000574295 1391 ntTSL 5 BASIC26.56■■□□□ 1.84
RC3H1Q5TC82 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC26.56■■□□□ 1.84
RC3H1Q5TC82 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
RC3H1Q5TC82 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC26.55■■□□□ 1.84
RC3H1Q5TC82 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RC3H1Q5TC82 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms