Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC34.66■■■■□ 3.14
SNAPC4Q5SXM2 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
SNAPC4Q5SXM2 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
SNAPC4Q5SXM2 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC34.66■■■■□ 3.14
SNAPC4Q5SXM2 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
SNAPC4Q5SXM2 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC34.66■■■■□ 3.14
SNAPC4Q5SXM2 REXO2-208ENST00000539754 791 ntTSL 2 BASIC34.66■■■■□ 3.14
SNAPC4Q5SXM2 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC34.66■■■■□ 3.14
SNAPC4Q5SXM2 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC34.66■■■■□ 3.14
SNAPC4Q5SXM2 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC34.66■■■■□ 3.14
SNAPC4Q5SXM2 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC34.66■■■■□ 3.14
SNAPC4Q5SXM2 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
SNAPC4Q5SXM2 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
SNAPC4Q5SXM2 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
SNAPC4Q5SXM2 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
SNAPC4Q5SXM2 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC34.65■■■■□ 3.14
SNAPC4Q5SXM2 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC34.65■■■■□ 3.14
SNAPC4Q5SXM2 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC34.65■■■■□ 3.14
SNAPC4Q5SXM2 ANOS2P-203ENST00000472227 1816 ntBASIC34.65■■■■□ 3.14
SNAPC4Q5SXM2 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC34.65■■■■□ 3.14
SNAPC4Q5SXM2 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC34.65■■■■□ 3.14
SNAPC4Q5SXM2 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC34.65■■■■□ 3.14
SNAPC4Q5SXM2 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC34.65■■■■□ 3.14
SNAPC4Q5SXM2 AC133681.1-201ENST00000465482 601 ntBASIC34.65■■■■□ 3.14
SNAPC4Q5SXM2 MTDHP1-201ENST00000605323 784 ntBASIC34.65■■■■□ 3.14
SNAPC4Q5SXM2 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
SNAPC4Q5SXM2 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC34.64■■■■□ 3.14
SNAPC4Q5SXM2 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC34.63■■■■□ 3.13
SNAPC4Q5SXM2 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC34.63■■■■□ 3.13
SNAPC4Q5SXM2 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC34.63■■■■□ 3.13
SNAPC4Q5SXM2 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC34.63■■■■□ 3.13
SNAPC4Q5SXM2 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC34.63■■■■□ 3.13
SNAPC4Q5SXM2 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC34.63■■■■□ 3.13
SNAPC4Q5SXM2 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC34.63■■■■□ 3.13
SNAPC4Q5SXM2 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC34.63■■■■□ 3.13
SNAPC4Q5SXM2 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC34.62■■■■□ 3.13
SNAPC4Q5SXM2 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
SNAPC4Q5SXM2 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC34.62■■■■□ 3.13
SNAPC4Q5SXM2 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC34.62■■■■□ 3.13
SNAPC4Q5SXM2 LY6E-205ENST00000519611 635 ntTSL 3 BASIC34.62■■■■□ 3.13
SNAPC4Q5SXM2 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC34.62■■■■□ 3.13
SNAPC4Q5SXM2 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC34.62■■■■□ 3.13
SNAPC4Q5SXM2 CRK-204ENST00000574295 1391 ntTSL 5 BASIC34.62■■■■□ 3.13
SNAPC4Q5SXM2 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC34.62■■■■□ 3.13
SNAPC4Q5SXM2 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
SNAPC4Q5SXM2 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC34.61■■■■□ 3.13
SNAPC4Q5SXM2 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC34.61■■■■□ 3.13
SNAPC4Q5SXM2 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC34.61■■■■□ 3.13
SNAPC4Q5SXM2 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC34.61■■■■□ 3.13
SNAPC4Q5SXM2 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
SNAPC4Q5SXM2 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC34.61■■■■□ 3.13
SNAPC4Q5SXM2 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
SNAPC4Q5SXM2 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
SNAPC4Q5SXM2 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC34.6■■■■□ 3.13
SNAPC4Q5SXM2 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
SNAPC4Q5SXM2 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC34.6■■■■□ 3.13
SNAPC4Q5SXM2 GCK-205ENST00000437084 1385 ntTSL 5 BASIC34.6■■■■□ 3.13
SNAPC4Q5SXM2 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
SNAPC4Q5SXM2 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC34.6■■■■□ 3.13
SNAPC4Q5SXM2 TMPOP1-202ENST00000424642 1267 ntBASIC34.6■■■■□ 3.13
SNAPC4Q5SXM2 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC34.6■■■■□ 3.13
SNAPC4Q5SXM2 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC34.6■■■■□ 3.13
SNAPC4Q5SXM2 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC34.6■■■■□ 3.13
SNAPC4Q5SXM2 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC34.6■■■■□ 3.13
SNAPC4Q5SXM2 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC34.6■■■■□ 3.13
SNAPC4Q5SXM2 CD177P1-201ENST00000606252 935 ntBASIC34.6■■■■□ 3.13
SNAPC4Q5SXM2 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC34.6■■■■□ 3.13
SNAPC4Q5SXM2 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC34.6■■■■□ 3.13
SNAPC4Q5SXM2 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
SNAPC4Q5SXM2 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
SNAPC4Q5SXM2 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC34.59■■■■□ 3.13
SNAPC4Q5SXM2 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC34.59■■■■□ 3.13
SNAPC4Q5SXM2 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC34.59■■■■□ 3.13
SNAPC4Q5SXM2 CDV3P1-201ENST00000471403 739 ntBASIC34.59■■■■□ 3.13
SNAPC4Q5SXM2 TK2-204ENST00000525974 1178 ntTSL 2 BASIC34.59■■■■□ 3.13
SNAPC4Q5SXM2 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC34.59■■■■□ 3.13
SNAPC4Q5SXM2 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC34.59■■■■□ 3.13
SNAPC4Q5SXM2 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC34.59■■■■□ 3.13
SNAPC4Q5SXM2 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
SNAPC4Q5SXM2 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC34.58■■■■□ 3.13
SNAPC4Q5SXM2 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC34.58■■■■□ 3.13
SNAPC4Q5SXM2 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
SNAPC4Q5SXM2 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC34.58■■■■□ 3.13
SNAPC4Q5SXM2 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC34.58■■■■□ 3.13
SNAPC4Q5SXM2 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC34.58■■■■□ 3.13
SNAPC4Q5SXM2 C2orf69P4-201ENST00000565394 541 ntBASIC34.58■■■■□ 3.13
SNAPC4Q5SXM2 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC34.57■■■■□ 3.12
SNAPC4Q5SXM2 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC34.57■■■■□ 3.12
SNAPC4Q5SXM2 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC34.57■■■■□ 3.12
SNAPC4Q5SXM2 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC34.57■■■■□ 3.12
SNAPC4Q5SXM2 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC34.57■■■■□ 3.12
SNAPC4Q5SXM2 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC34.56■■■■□ 3.12
SNAPC4Q5SXM2 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
SNAPC4Q5SXM2 AC239809.2-201ENST00000415381 517 ntBASIC34.56■■■■□ 3.12
SNAPC4Q5SXM2 VMO1-204ENST00000441199 741 ntTSL 2 BASIC34.56■■■■□ 3.12
SNAPC4Q5SXM2 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC34.56■■■■□ 3.12
SNAPC4Q5SXM2 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC34.56■■■■□ 3.12
SNAPC4Q5SXM2 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC34.56■■■■□ 3.12
SNAPC4Q5SXM2 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
SNAPC4Q5SXM2 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC34.55■■■■□ 3.12
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms