Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.73■□□□□ 0.75
RUNDC3AQ59EK9 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.73■□□□□ 0.75
RUNDC3AQ59EK9 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
RUNDC3AQ59EK9 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
RUNDC3AQ59EK9 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RUNDC3AQ59EK9 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RUNDC3AQ59EK9 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RUNDC3AQ59EK9 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RUNDC3AQ59EK9 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.73■□□□□ 0.75
RUNDC3AQ59EK9 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.73■□□□□ 0.75
RUNDC3AQ59EK9 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RUNDC3AQ59EK9 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RUNDC3AQ59EK9 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
RUNDC3AQ59EK9 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RUNDC3AQ59EK9 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RUNDC3AQ59EK9 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.72■□□□□ 0.75
RUNDC3AQ59EK9 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RUNDC3AQ59EK9 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RUNDC3AQ59EK9 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
RUNDC3AQ59EK9 AC009237.3-201ENST00000393279 1427 ntBASIC19.72■□□□□ 0.75
RUNDC3AQ59EK9 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.72■□□□□ 0.75
RUNDC3AQ59EK9 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RUNDC3AQ59EK9 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.72■□□□□ 0.75
RUNDC3AQ59EK9 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.72■□□□□ 0.75
RUNDC3AQ59EK9 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.72■□□□□ 0.75
RUNDC3AQ59EK9 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.72■□□□□ 0.75
RUNDC3AQ59EK9 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RUNDC3AQ59EK9 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RUNDC3AQ59EK9 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RUNDC3AQ59EK9 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.72■□□□□ 0.75
RUNDC3AQ59EK9 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
RUNDC3AQ59EK9 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RUNDC3AQ59EK9 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RUNDC3AQ59EK9 AC055733.4-201ENST00000638462 1354 ntBASIC19.71■□□□□ 0.75
RUNDC3AQ59EK9 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.71■□□□□ 0.75
RUNDC3AQ59EK9 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RUNDC3AQ59EK9 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RUNDC3AQ59EK9 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RUNDC3AQ59EK9 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RUNDC3AQ59EK9 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RUNDC3AQ59EK9 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RUNDC3AQ59EK9 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RUNDC3AQ59EK9 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RUNDC3AQ59EK9 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.71■□□□□ 0.75
RUNDC3AQ59EK9 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.71■□□□□ 0.75
RUNDC3AQ59EK9 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RUNDC3AQ59EK9 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
RUNDC3AQ59EK9 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RUNDC3AQ59EK9 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
RUNDC3AQ59EK9 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RUNDC3AQ59EK9 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.71■□□□□ 0.75
RUNDC3AQ59EK9 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RUNDC3AQ59EK9 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RUNDC3AQ59EK9 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RUNDC3AQ59EK9 AC027702.1-201ENST00000563810 1770 ntBASIC19.7■□□□□ 0.74
RUNDC3AQ59EK9 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RUNDC3AQ59EK9 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RUNDC3AQ59EK9 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.7■□□□□ 0.74
RUNDC3AQ59EK9 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RUNDC3AQ59EK9 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RUNDC3AQ59EK9 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RUNDC3AQ59EK9 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
RUNDC3AQ59EK9 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.69■□□□□ 0.74
RUNDC3AQ59EK9 AC007225.1-201ENST00000566331 1836 ntBASIC19.69■□□□□ 0.74
RUNDC3AQ59EK9 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.69■□□□□ 0.74
RUNDC3AQ59EK9 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RUNDC3AQ59EK9 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RUNDC3AQ59EK9 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RUNDC3AQ59EK9 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RUNDC3AQ59EK9 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RUNDC3AQ59EK9 MIR4767-201ENST00000582827 78 ntBASIC19.69■□□□□ 0.74
RUNDC3AQ59EK9 AC233992.3-201ENST00000607491 485 ntBASIC19.69■□□□□ 0.74
RUNDC3AQ59EK9 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RUNDC3AQ59EK9 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.69■□□□□ 0.74
RUNDC3AQ59EK9 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
RUNDC3AQ59EK9 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
RUNDC3AQ59EK9 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RUNDC3AQ59EK9 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
RUNDC3AQ59EK9 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RUNDC3AQ59EK9 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RUNDC3AQ59EK9 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
RUNDC3AQ59EK9 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
RUNDC3AQ59EK9 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RUNDC3AQ59EK9 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RUNDC3AQ59EK9 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RUNDC3AQ59EK9 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.68■□□□□ 0.74
RUNDC3AQ59EK9 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RUNDC3AQ59EK9 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
RUNDC3AQ59EK9 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RUNDC3AQ59EK9 AL121603.2-201ENST00000557373 2117 ntBASIC19.68■□□□□ 0.74
RUNDC3AQ59EK9 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.68■□□□□ 0.74
RUNDC3AQ59EK9 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RUNDC3AQ59EK9 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RUNDC3AQ59EK9 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
RUNDC3AQ59EK9 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RUNDC3AQ59EK9 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RUNDC3AQ59EK9 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RUNDC3AQ59EK9 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RUNDC3AQ59EK9 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.67■□□□□ 0.74
RUNDC3AQ59EK9 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms