Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.33■□□□□ 0.37
ANKRD55Q3KP44 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ANKRD55Q3KP44 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17.33■□□□□ 0.37
ANKRD55Q3KP44 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.33■□□□□ 0.36
ANKRD55Q3KP44 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ANKRD55Q3KP44 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ANKRD55Q3KP44 KRT16P3-201ENST00000439127 1283 ntBASIC17.33■□□□□ 0.36
ANKRD55Q3KP44 TSPY9P-201ENST00000440215 945 ntBASIC17.33■□□□□ 0.36
ANKRD55Q3KP44 TSPY11P-201ENST00000442607 1045 ntBASIC17.33■□□□□ 0.36
ANKRD55Q3KP44 CREM-229ENST00000474362 1030 ntTSL 2 BASIC17.33■□□□□ 0.36
ANKRD55Q3KP44 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ANKRD55Q3KP44 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.33■□□□□ 0.36
ANKRD55Q3KP44 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ANKRD55Q3KP44 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
ANKRD55Q3KP44 AC020907.5-201ENST00000624372 1936 ntBASIC17.33■□□□□ 0.36
ANKRD55Q3KP44 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ANKRD55Q3KP44 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ANKRD55Q3KP44 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ANKRD55Q3KP44 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.32■□□□□ 0.36
ANKRD55Q3KP44 AC112907.3-201ENST00000577781 2400 ntBASIC17.32■□□□□ 0.36
ANKRD55Q3KP44 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
ANKRD55Q3KP44 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ANKRD55Q3KP44 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ANKRD55Q3KP44 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC17.32■□□□□ 0.36
ANKRD55Q3KP44 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ANKRD55Q3KP44 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
ANKRD55Q3KP44 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
ANKRD55Q3KP44 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.32■□□□□ 0.36
ANKRD55Q3KP44 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ANKRD55Q3KP44 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ANKRD55Q3KP44 CD72-202ENST00000378430 585 ntTSL 3 BASIC17.32■□□□□ 0.36
ANKRD55Q3KP44 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ANKRD55Q3KP44 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC17.32■□□□□ 0.36
ANKRD55Q3KP44 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ANKRD55Q3KP44 AC087289.5-201ENST00000586076 3175 ntBASIC17.32■□□□□ 0.36
ANKRD55Q3KP44 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.32■□□□□ 0.36
ANKRD55Q3KP44 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
ANKRD55Q3KP44 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ANKRD55Q3KP44 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ANKRD55Q3KP44 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ANKRD55Q3KP44 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ANKRD55Q3KP44 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ANKRD55Q3KP44 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ANKRD55Q3KP44 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ANKRD55Q3KP44 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.32■□□□□ 0.36
ANKRD55Q3KP44 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC17.32■□□□□ 0.36
ANKRD55Q3KP44 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ANKRD55Q3KP44 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ANKRD55Q3KP44 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ANKRD55Q3KP44 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ANKRD55Q3KP44 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.31■□□□□ 0.36
ANKRD55Q3KP44 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
ANKRD55Q3KP44 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.31■□□□□ 0.36
ANKRD55Q3KP44 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
ANKRD55Q3KP44 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ANKRD55Q3KP44 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ANKRD55Q3KP44 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.31■□□□□ 0.36
ANKRD55Q3KP44 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.31■□□□□ 0.36
ANKRD55Q3KP44 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ANKRD55Q3KP44 RBM38-205ENST00000440234 686 ntTSL 2 BASIC17.31■□□□□ 0.36
ANKRD55Q3KP44 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.31■□□□□ 0.36
ANKRD55Q3KP44 AC010997.5-201ENST00000609182 354 ntBASIC17.31■□□□□ 0.36
ANKRD55Q3KP44 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ANKRD55Q3KP44 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.31■□□□□ 0.36
ANKRD55Q3KP44 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ANKRD55Q3KP44 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.31■□□□□ 0.36
ANKRD55Q3KP44 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
ANKRD55Q3KP44 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ANKRD55Q3KP44 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ANKRD55Q3KP44 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.31■□□□□ 0.36
ANKRD55Q3KP44 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ANKRD55Q3KP44 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ANKRD55Q3KP44 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.31■□□□□ 0.36
ANKRD55Q3KP44 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ANKRD55Q3KP44 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.31■□□□□ 0.36
ANKRD55Q3KP44 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.3■□□□□ 0.36
ANKRD55Q3KP44 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ANKRD55Q3KP44 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ANKRD55Q3KP44 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ANKRD55Q3KP44 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.3■□□□□ 0.36
ANKRD55Q3KP44 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ANKRD55Q3KP44 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
ANKRD55Q3KP44 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ANKRD55Q3KP44 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC17.3■□□□□ 0.36
ANKRD55Q3KP44 AC068587.7-201ENST00000641602 218 ntBASIC17.3■□□□□ 0.36
ANKRD55Q3KP44 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
ANKRD55Q3KP44 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ANKRD55Q3KP44 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ANKRD55Q3KP44 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ANKRD55Q3KP44 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.29■□□□□ 0.36
ANKRD55Q3KP44 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
ANKRD55Q3KP44 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ANKRD55Q3KP44 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
ANKRD55Q3KP44 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
ANKRD55Q3KP44 AL356441.2-201ENST00000443009 864 ntBASIC17.29■□□□□ 0.36
ANKRD55Q3KP44 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
ANKRD55Q3KP44 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ANKRD55Q3KP44 GRAMD4P7-201ENST00000578182 1232 ntBASIC17.29■□□□□ 0.36
ANKRD55Q3KP44 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.29■□□□□ 0.36
ANKRD55Q3KP44 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms