Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.86■□□□□ 0.45
EFNB3Q15768 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
EFNB3Q15768 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
EFNB3Q15768 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
EFNB3Q15768 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
EFNB3Q15768 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
EFNB3Q15768 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
EFNB3Q15768 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
EFNB3Q15768 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
EFNB3Q15768 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
EFNB3Q15768 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
EFNB3Q15768 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
EFNB3Q15768 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
EFNB3Q15768 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
EFNB3Q15768 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
EFNB3Q15768 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.85■□□□□ 0.45
EFNB3Q15768 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.85■□□□□ 0.45
EFNB3Q15768 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
EFNB3Q15768 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.85■□□□□ 0.45
EFNB3Q15768 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
EFNB3Q15768 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.85■□□□□ 0.45
EFNB3Q15768 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.85■□□□□ 0.45
EFNB3Q15768 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
EFNB3Q15768 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.84■□□□□ 0.45
EFNB3Q15768 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
EFNB3Q15768 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
EFNB3Q15768 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.84■□□□□ 0.45
EFNB3Q15768 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.84■□□□□ 0.45
EFNB3Q15768 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
EFNB3Q15768 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
EFNB3Q15768 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
EFNB3Q15768 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
EFNB3Q15768 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
EFNB3Q15768 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
EFNB3Q15768 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
EFNB3Q15768 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
EFNB3Q15768 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
EFNB3Q15768 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
EFNB3Q15768 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.84■□□□□ 0.45
EFNB3Q15768 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.84■□□□□ 0.45
EFNB3Q15768 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
EFNB3Q15768 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.84■□□□□ 0.45
EFNB3Q15768 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.84■□□□□ 0.45
EFNB3Q15768 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
EFNB3Q15768 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
EFNB3Q15768 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
EFNB3Q15768 TERT-206ENST00000508104 2486 ntTSL 5 BASIC17.83■□□□□ 0.45
EFNB3Q15768 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
EFNB3Q15768 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
EFNB3Q15768 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
EFNB3Q15768 GOLGA2P6-201ENST00000340929 2049 ntBASIC17.83■□□□□ 0.45
EFNB3Q15768 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
EFNB3Q15768 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
EFNB3Q15768 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
EFNB3Q15768 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.83■□□□□ 0.44
EFNB3Q15768 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.83■□□□□ 0.44
EFNB3Q15768 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.83■□□□□ 0.44
EFNB3Q15768 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.83■□□□□ 0.44
EFNB3Q15768 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.83■□□□□ 0.44
EFNB3Q15768 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.83■□□□□ 0.44
EFNB3Q15768 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.83■□□□□ 0.44
EFNB3Q15768 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.83■□□□□ 0.44
EFNB3Q15768 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
EFNB3Q15768 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
EFNB3Q15768 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
EFNB3Q15768 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
EFNB3Q15768 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
EFNB3Q15768 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
EFNB3Q15768 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.82■□□□□ 0.44
EFNB3Q15768 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
EFNB3Q15768 C11orf96-202ENST00000528572 1834 ntBASIC17.82■□□□□ 0.44
EFNB3Q15768 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.82■□□□□ 0.44
EFNB3Q15768 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
EFNB3Q15768 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.82■□□□□ 0.44
EFNB3Q15768 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
EFNB3Q15768 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
EFNB3Q15768 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
EFNB3Q15768 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
EFNB3Q15768 AC073210.2-201ENST00000430369 194 ntBASIC17.82■□□□□ 0.44
EFNB3Q15768 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
EFNB3Q15768 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
EFNB3Q15768 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
EFNB3Q15768 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
EFNB3Q15768 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
EFNB3Q15768 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
EFNB3Q15768 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EFNB3Q15768 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EFNB3Q15768 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
EFNB3Q15768 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.81■□□□□ 0.44
EFNB3Q15768 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
EFNB3Q15768 RARRES2P4-201ENST00000514074 484 ntBASIC17.81■□□□□ 0.44
EFNB3Q15768 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
EFNB3Q15768 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.81■□□□□ 0.44
EFNB3Q15768 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.81■□□□□ 0.44
EFNB3Q15768 MKRN4P-201ENST00000444706 1521 ntBASIC17.81■□□□□ 0.44
EFNB3Q15768 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
EFNB3Q15768 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EFNB3Q15768 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
EFNB3Q15768 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
EFNB3Q15768 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms