Protein–RNA interactions for Protein: Q04673

SSL1, General transcription and DNA repair factor IIH subunit SSL1, yeastyeast

Predicted RBP Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL1Q04673 snR59snR59 78 nt4□□□□□ -1.77
SSL1Q04673 CPR5YDR304C 678 nt4□□□□□ -1.77
SSL1Q04673 YER135CYER135C 393 nt4□□□□□ -1.77
SSL1Q04673 SEC53YFL045C 765 nt4□□□□□ -1.77
SSL1Q04673 RTT102YGR275W 474 nt4□□□□□ -1.77
SSL1Q04673 EMC2YJR088C 879 nt4□□□□□ -1.77
SSL1Q04673 TDA8YAL064C-A 381 nt4□□□□□ -1.77
SSL1Q04673 YMR193C-AYMR193C-A 387 nt4□□□□□ -1.77
SSL1Q04673 TIF11YMR260C 462 nt4□□□□□ -1.77
SSL1Q04673 IST1YNL265C 897 nt4□□□□□ -1.77
SSL1Q04673 INO4YOL108C 456 nt4□□□□□ -1.77
SSL1Q04673 YOR331CYOR331C 558 nt4□□□□□ -1.77
SSL1Q04673 YHR214C-CYHR214C-C 1437 nt4□□□□□ -1.77
SSL1Q04673 UTP25YIL091C 2166 nt4□□□□□ -1.77
SSL1Q04673 SSL1YLR005W 1386 nt4□□□□□ -1.77
SSL1Q04673 PES4YFR023W 1836 nt4□□□□□ -1.77
SSL1Q04673 TPA1YER049W 1935 nt3.99□□□□□ -1.77
SSL1Q04673 HSP30YCR021C 999 nt3.99□□□□□ -1.77
SSL1Q04673 ELO2YCR034W 1044 nt3.99□□□□□ -1.77
SSL1Q04673 BMH2YDR099W 822 nt3.99□□□□□ -1.77
SSL1Q04673 YER068C-AYER068C-A 432 nt3.99□□□□□ -1.77
SSL1Q04673 YPR136CYPR136C 513 nt3.99□□□□□ -1.77
SSL1Q04673 FRM2YCL026C-A 582 nt3.99□□□□□ -1.77
SSL1Q04673 SPT23YKL020C 3249 nt3.99□□□□□ -1.77
SSL1Q04673 SHS1YDL225W 1656 nt3.99□□□□□ -1.77
SSL1Q04673 YOL019WYOL019W 1656 nt3.99□□□□□ -1.77
SSL1Q04673 VAC7YNL054W 3498 nt3.99□□□□□ -1.77
SSL1Q04673 VPS9YML097C 1356 nt3.99□□□□□ -1.77
SSL1Q04673 NCS2YNL119W 1482 nt3.98□□□□□ -1.77
SSL1Q04673 PTA1YAL043C 2358 nt3.98□□□□□ -1.77
SSL1Q04673 YRM1YOR172W 2361 nt3.98□□□□□ -1.77
SSL1Q04673 KRE5YOR336W 4098 nt3.98□□□□□ -1.77
SSL1Q04673 SWF1YDR126W 1011 nt3.98□□□□□ -1.77
SSL1Q04673 SPC19YDR201W 498 nt3.98□□□□□ -1.77
SSL1Q04673 PCL5YHR071W 690 nt3.98□□□□□ -1.77
SSL1Q04673 YML116W-AYML116W-A 303 nt3.98□□□□□ -1.77
SSL1Q04673 RIM11YMR139W 1113 nt3.98□□□□□ -1.77
SSL1Q04673 RPS16AYMR143W 432 nt3.98□□□□□ -1.77
SSL1Q04673 YPL185WYPL185W 396 nt3.98□□□□□ -1.77
SSL1Q04673 YPR096CYPR096C 303 nt3.98□□□□□ -1.77
SSL1Q04673 MSS18YPR134W 807 nt3.98□□□□□ -1.77
SSL1Q04673 YBR209WYBR209W 318 nt3.98□□□□□ -1.77
SSL1Q04673 DPB3YBR278W 606 nt3.98□□□□□ -1.77
SSL1Q04673 YBR285WYBR285W 435 nt3.98□□□□□ -1.77
SSL1Q04673 PEP7YDR323C 1548 nt3.98□□□□□ -1.77
SSL1Q04673 SEN1YLR430W 6696 nt3.97□□□□□ -1.77
SSL1Q04673 YGR117CYGR117C 1431 nt3.97□□□□□ -1.77
SSL1Q04673 FMP25YLR077W 1752 nt3.97□□□□□ -1.77
SSL1Q04673 ASI1YMR119W 1875 nt3.97□□□□□ -1.77
SSL1Q04673 YDR537CYDR537C 606 nt3.97□□□□□ -1.77
SSL1Q04673 YGR017WYGR017W 894 nt3.97□□□□□ -1.77
SSL1Q04673 RPS20YHL015W 366 nt3.97□□□□□ -1.77
SSL1Q04673 YIR014WYIR014W 729 nt3.97□□□□□ -1.77
SSL1Q04673 RPA12YJR063W 378 nt3.97□□□□□ -1.77
SSL1Q04673 FLD1YLR404W 858 nt3.97□□□□□ -1.77
SSL1Q04673 SIW14YNL032W 846 nt3.97□□□□□ -1.77
SSL1Q04673 HUB1YNR032C-A 222 nt3.97□□□□□ -1.77
SSL1Q04673 RPC40YPR110C 1008 nt3.97□□□□□ -1.77
SSL1Q04673 VPS45YGL095C 1734 nt3.97□□□□□ -1.77
SSL1Q04673 TOG1YER184C 2385 nt3.96□□□□□ -1.78
SSL1Q04673 RRI2YOL117W 1938 nt3.96□□□□□ -1.78
SSL1Q04673 GPI19YDR437W 423 nt3.96□□□□□ -1.78
SSL1Q04673 YJL086CYJL086C 369 nt3.96□□□□□ -1.78
SSL1Q04673 UTP11YKL099C 753 nt3.96□□□□□ -1.78
SSL1Q04673 RPL40BYKR094C 387 nt3.96□□□□□ -1.78
SSL1Q04673 RPL6BYLR448W 531 nt3.96□□□□□ -1.78
SSL1Q04673 IDH2YOR136W 1110 nt3.96□□□□□ -1.78
SSL1Q04673 FMP23YBR047W 528 nt3.96□□□□□ -1.78
SSL1Q04673 CDC55YGL190C 1581 nt3.96□□□□□ -1.78
SSL1Q04673 MIP6YHR015W 1980 nt3.96□□□□□ -1.78
SSL1Q04673 KAR9YPL269W 1935 nt3.95□□□□□ -1.78
SSL1Q04673 YER181CYER181C 324 nt3.95□□□□□ -1.78
SSL1Q04673 ERV1YGR029W 570 nt3.95□□□□□ -1.78
SSL1Q04673 AGE2YIL044C 897 nt3.95□□□□□ -1.78
SSL1Q04673 PDP3YLR455W 915 nt3.95□□□□□ -1.78
SSL1Q04673 YOR392WYOR392W 444 nt3.95□□□□□ -1.78
SSL1Q04673 ARR2YPR200C 393 nt3.95□□□□□ -1.78
SSL1Q04673 RAD1YPL022W 3303 nt3.95□□□□□ -1.78
SSL1Q04673 YGL015CYGL015C 393 nt3.94□□□□□ -1.78
SSL1Q04673 PEP8YJL053W 1140 nt3.94□□□□□ -1.78
SSL1Q04673 HIT1YJR055W 495 nt3.94□□□□□ -1.78
SSL1Q04673 ECM4YKR076W 1113 nt3.94□□□□□ -1.78
SSL1Q04673 RPS1AYLR441C 768 nt3.94□□□□□ -1.78
SSL1Q04673 YBR141W-AYBR141W-A 96 nt3.94□□□□□ -1.78
SSL1Q04673 YMR018WYMR018W 1545 nt3.94□□□□□ -1.78
SSL1Q04673 VPS73YGL104C 1461 nt3.93□□□□□ -1.78
SSL1Q04673 APC5YOR249C 2058 nt3.93□□□□□ -1.78
SSL1Q04673 SSF1YHR066W 1362 nt3.93□□□□□ -1.78
SSL1Q04673 MIC19YFR011C 513 nt3.93□□□□□ -1.78
SSL1Q04673 YIL141WYIL141W 390 nt3.93□□□□□ -1.78
SSL1Q04673 YKL066WYKL066W 444 nt3.93□□□□□ -1.78
SSL1Q04673 RNH203YLR154C 333 nt3.93□□□□□ -1.78
SSL1Q04673 RPL13BYMR142C 600 nt3.93□□□□□ -1.78
SSL1Q04673 CMC2YBL059C-A 330 nt3.93□□□□□ -1.78
SSL1Q04673 ATX1YNL259C 222 nt3.93□□□□□ -1.78
SSL1Q04673 YPR059CYPR059C 387 nt3.93□□□□□ -1.78
SSL1Q04673 BRE5YNR051C 1548 nt3.93□□□□□ -1.78
SSL1Q04673 TDA1YMR291W 1761 nt3.93□□□□□ -1.78
SSL1Q04673 STI1YOR027W 1770 nt3.93□□□□□ -1.78
SSL1Q04673 PIN4YBL051C 2007 nt3.93□□□□□ -1.78
Retrieved 100 of 7,029 protein–RNA pairs in 15.3 ms