Protein–RNA interactions for Protein: Q03390

VPS60, Vacuolar protein-sorting-associated protein 60, yeastyeast

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS60Q03390 COX14YML129C 213 nt2.57□□□□□ -2
VPS60Q03390 MRPL33YMR286W 261 nt2.57□□□□□ -2
VPS60Q03390 INO4YOL108C 456 nt2.57□□□□□ -2
VPS60Q03390 YKL075CYKL075C 1353 nt2.57□□□□□ -2
VPS60Q03390 FKS3YMR306W 5358 nt2.57□□□□□ -2
VPS60Q03390 AI4Q0065 1671 nt2.57□□□□□ -2
VPS60Q03390 PDR11YIL013C 4236 nt2.57□□□□□ -2
VPS60Q03390 SAK1YER129W 3429 nt2.56□□□□□ -2
VPS60Q03390 HFM1YGL251C 3564 nt2.56□□□□□ -2
VPS60Q03390 YDR124WYDR124W 975 nt2.56□□□□□ -2
VPS60Q03390 TCA17YEL048C 459 nt2.56□□□□□ -2
VPS60Q03390 RTT105YER104W 627 nt2.56□□□□□ -2
VPS60Q03390 MPC1YGL080W 393 nt2.56□□□□□ -2
VPS60Q03390 PEX18YHR160C 852 nt2.56□□□□□ -2
VPS60Q03390 ARG3YJL088W 1017 nt2.56□□□□□ -2
VPS60Q03390 YAL059C-AYAL059C-A 423 nt2.56□□□□□ -2
VPS60Q03390 CAT5YOR125C 702 nt2.56□□□□□ -2
VPS60Q03390 GRX7YBR014C 612 nt2.56□□□□□ -2
VPS60Q03390 RPS12YOR369C 432 nt2.56□□□□□ -2
VPS60Q03390 DPB3YBR278W 606 nt2.56□□□□□ -2
VPS60Q03390 SIR3YLR442C 2937 nt2.56□□□□□ -2
VPS60Q03390 MCD1YDL003W 1701 nt2.56□□□□□ -2
VPS60Q03390 CDC5YMR001C 2118 nt2.56□□□□□ -2
VPS60Q03390 AI3Q0060 1248 nt2.55□□□□□ -2
VPS60Q03390 NSA2YER126C 786 nt2.55□□□□□ -2
VPS60Q03390 PEX14YGL153W 1026 nt2.55□□□□□ -2
VPS60Q03390 UPF3YGR072W 1164 nt2.55□□□□□ -2
VPS60Q03390 YHR182C-AYHR182C-A 474 nt2.55□□□□□ -2
VPS60Q03390 YLR076CYLR076C 423 nt2.55□□□□□ -2
VPS60Q03390 BNI4YNL233W 2679 nt2.55□□□□□ -2
VPS60Q03390 SKP2YNL311C 2292 nt2.55□□□□□ -2
VPS60Q03390 MSN1YOL116W 1149 nt2.55□□□□□ -2
VPS60Q03390 IRC13YOR235W 315 nt2.55□□□□□ -2
VPS60Q03390 SLY41YOR307C 1362 nt2.55□□□□□ -2
VPS60Q03390 DSE1YER124C 1722 nt2.54□□□□□ -2
VPS60Q03390 OSW7YFR039C 1533 nt2.54□□□□□ -2
VPS60Q03390 PLP1YDR183W 693 nt2.54□□□□□ -2
VPS60Q03390 RPB9YGL070C 369 nt2.54□□□□□ -2
VPS60Q03390 FMP41YNL168C 780 nt2.54□□□□□ -2
VPS60Q03390 SRL1YOR247W 633 nt2.54□□□□□ -2
VPS60Q03390 CCL1YPR025C 1182 nt2.54□□□□□ -2
VPS60Q03390 YBR201C-AYBR201C-A 204 nt2.54□□□□□ -2
VPS60Q03390 FRE8YLR047C 2061 nt2.54□□□□□ -2
VPS60Q03390 SSD1YDR293C 3753 nt2.54□□□□□ -2
VPS60Q03390 CSF1YLR087C 8877 nt2.54□□□□□ -2
VPS60Q03390 MSB1YOR188W 3414 nt2.54□□□□□ -2
VPS60Q03390 IRA2YOL081W 9240 nt2.53□□□□□ -2
VPS60Q03390 PHO2YDL106C 1680 nt2.53□□□□□ -2
VPS60Q03390 SMY2YBR172C 2223 nt2.53□□□□□ -2
VPS60Q03390 PEX15YOL044W 1152 nt2.53□□□□□ -2
VPS60Q03390 YOL114CYOL114C 609 nt2.53□□□□□ -2
VPS60Q03390 TFB6YOR352W 1032 nt2.53□□□□□ -2
VPS60Q03390 ISU1YPL135W 498 nt2.53□□□□□ -2
VPS60Q03390 LTP1YPR073C 486 nt2.53□□□□□ -2
VPS60Q03390 RFC5YBR087W 1065 nt2.53□□□□□ -2
VPS60Q03390 TIM12YBR091C 330 nt2.53□□□□□ -2
VPS60Q03390 TOP2YNL088W 4287 nt2.53□□□□□ -2
VPS60Q03390 MED1YPR070W 1701 nt2.53□□□□□ -2
VPS60Q03390 21S_rRNA21S_rRNA 3296 nt2.53□□□□□ -2
VPS60Q03390 GCD2YGR083C 1956 nt2.52□□□□□ -2.01
VPS60Q03390 RGI1YER067W 486 nt2.52□□□□□ -2.01
VPS60Q03390 YGL177WYGL177W 348 nt2.52□□□□□ -2.01
VPS60Q03390 RPA12YJR063W 378 nt2.52□□□□□ -2.01
VPS60Q03390 NNF1YJR112W 606 nt2.52□□□□□ -2.01
VPS60Q03390 INP1YMR204C 1263 nt2.52□□□□□ -2.01
VPS60Q03390 RGR1YLR071C 3249 nt2.52□□□□□ -2.01
VPS60Q03390 TAF2YCR042C 4224 nt2.51□□□□□ -2.01
VPS60Q03390 GEA1YJR031C 4227 nt2.51□□□□□ -2.01
VPS60Q03390 tC(GCA)BtC(GCA)B 72 nt2.51□□□□□ -2.01
VPS60Q03390 tC(GCA)GtC(GCA)G 72 nt2.51□□□□□ -2.01
VPS60Q03390 tC(GCA)P1tC(GCA)P1 72 nt2.51□□□□□ -2.01
VPS60Q03390 tC(GCA)P2tC(GCA)P2 72 nt2.51□□□□□ -2.01
VPS60Q03390 MFA1YDR461W 111 nt2.51□□□□□ -2.01
VPS60Q03390 MEI4YER044C-A 1227 nt2.51□□□□□ -2.01
VPS60Q03390 HTD2YHR067W 843 nt2.51□□□□□ -2.01
VPS60Q03390 VPS25YJR102C 609 nt2.51□□□□□ -2.01
VPS60Q03390 BOS1YLR078C 735 nt2.51□□□□□ -2.01
VPS60Q03390 YML090WYML090W 387 nt2.51□□□□□ -2.01
VPS60Q03390 SUB1YMR039C 879 nt2.51□□□□□ -2.01
VPS60Q03390 FYV6YNL133C 522 nt2.51□□□□□ -2.01
VPS60Q03390 YNL203CYNL203C 612 nt2.51□□□□□ -2.01
VPS60Q03390 YOR387CYOR387C 621 nt2.51□□□□□ -2.01
VPS60Q03390 ORC2YBR060C 1863 nt2.51□□□□□ -2.01
VPS60Q03390 SAP185YJL098W 3177 nt2.51□□□□□ -2.01
VPS60Q03390 BI3Q0115 1554 nt2.5□□□□□ -2.01
VPS60Q03390 YER066C-AYER066C-A 501 nt2.5□□□□□ -2.01
VPS60Q03390 tW(CCA)G1tW(CCA)G1 72 nt2.5□□□□□ -2.01
VPS60Q03390 tW(CCA)G2tW(CCA)G2 72 nt2.5□□□□□ -2.01
VPS60Q03390 tW(CCA)JtW(CCA)J 72 nt2.5□□□□□ -2.01
VPS60Q03390 tW(CCA)KtW(CCA)K 72 nt2.5□□□□□ -2.01
VPS60Q03390 tW(CCA)MtW(CCA)M 72 nt2.5□□□□□ -2.01
VPS60Q03390 tW(CCA)PtW(CCA)P 72 nt2.5□□□□□ -2.01
VPS60Q03390 SDO1YLR022C 753 nt2.5□□□□□ -2.01
VPS60Q03390 TSR4YOL022C 1227 nt2.5□□□□□ -2.01
VPS60Q03390 TPT1YOL102C 693 nt2.5□□□□□ -2.01
VPS60Q03390 YOR097CYOR097C 528 nt2.5□□□□□ -2.01
VPS60Q03390 CWH41YGL027C 2502 nt2.5□□□□□ -2.01
VPS60Q03390 EAP1YKL204W 1899 nt2.5□□□□□ -2.01
VPS60Q03390 AVT5YBL089W 1380 nt2.49□□□□□ -2.01
VPS60Q03390 SWR1YDR334W 4545 nt2.49□□□□□ -2.01
Retrieved 100 of 7,029 protein–RNA pairs in 26.7 ms