Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.86■□□□□ 0.61
CDK5Q00535 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.86■□□□□ 0.61
CDK5Q00535 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CDK5Q00535 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDK5Q00535 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.86■□□□□ 0.61
CDK5Q00535 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDK5Q00535 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDK5Q00535 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDK5Q00535 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
CDK5Q00535 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.85■□□□□ 0.61
CDK5Q00535 AC055733.4-201ENST00000638462 1354 ntBASIC18.85■□□□□ 0.61
CDK5Q00535 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDK5Q00535 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDK5Q00535 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDK5Q00535 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.85■□□□□ 0.61
CDK5Q00535 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CDK5Q00535 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDK5Q00535 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.85■□□□□ 0.61
CDK5Q00535 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDK5Q00535 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDK5Q00535 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.85■□□□□ 0.61
CDK5Q00535 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.85■□□□□ 0.61
CDK5Q00535 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDK5Q00535 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.85■□□□□ 0.61
CDK5Q00535 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDK5Q00535 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDK5Q00535 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.84■□□□□ 0.61
CDK5Q00535 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDK5Q00535 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDK5Q00535 AC009237.3-201ENST00000393279 1427 ntBASIC18.84■□□□□ 0.61
CDK5Q00535 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CDK5Q00535 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDK5Q00535 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDK5Q00535 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.84■□□□□ 0.61
CDK5Q00535 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.84■□□□□ 0.61
CDK5Q00535 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDK5Q00535 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDK5Q00535 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CDK5Q00535 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.84■□□□□ 0.61
CDK5Q00535 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.84■□□□□ 0.61
CDK5Q00535 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDK5Q00535 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.84■□□□□ 0.61
CDK5Q00535 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CDK5Q00535 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.84■□□□□ 0.61
CDK5Q00535 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.84■□□□□ 0.61
CDK5Q00535 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.84■□□□□ 0.61
CDK5Q00535 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.84■□□□□ 0.61
CDK5Q00535 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CDK5Q00535 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.84■□□□□ 0.61
CDK5Q00535 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.84■□□□□ 0.61
CDK5Q00535 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDK5Q00535 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDK5Q00535 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
CDK5Q00535 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDK5Q00535 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDK5Q00535 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CDK5Q00535 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CDK5Q00535 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDK5Q00535 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
CDK5Q00535 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDK5Q00535 BX842568.3-201ENST00000418104 571 ntBASIC18.83■□□□□ 0.6
CDK5Q00535 TRIR-205ENST00000592273 783 ntTSL 3 BASIC18.83■□□□□ 0.6
CDK5Q00535 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDK5Q00535 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDK5Q00535 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CDK5Q00535 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDK5Q00535 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDK5Q00535 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CDK5Q00535 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDK5Q00535 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDK5Q00535 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDK5Q00535 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDK5Q00535 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDK5Q00535 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDK5Q00535 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CDK5Q00535 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CDK5Q00535 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDK5Q00535 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.82■□□□□ 0.6
CDK5Q00535 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.82■□□□□ 0.6
CDK5Q00535 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CDK5Q00535 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDK5Q00535 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.82■□□□□ 0.6
CDK5Q00535 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.82■□□□□ 0.6
CDK5Q00535 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDK5Q00535 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDK5Q00535 AL162377.1-201ENST00000618844 1793 ntBASIC18.82■□□□□ 0.6
CDK5Q00535 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDK5Q00535 AL391422.3-201ENST00000603791 2761 ntBASIC18.82■□□□□ 0.6
CDK5Q00535 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.82■□□□□ 0.6
CDK5Q00535 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.82■□□□□ 0.6
CDK5Q00535 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDK5Q00535 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDK5Q00535 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.82■□□□□ 0.6
CDK5Q00535 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDK5Q00535 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDK5Q00535 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDK5Q00535 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CDK5Q00535 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.81■□□□□ 0.6
CDK5Q00535 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CDK5Q00535 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms