Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
IRX4P78413 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
IRX4P78413 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
IRX4P78413 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
IRX4P78413 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.64■■□□□ 1.06
IRX4P78413 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
IRX4P78413 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
IRX4P78413 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.64■■□□□ 1.05
IRX4P78413 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
IRX4P78413 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
IRX4P78413 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.64■■□□□ 1.05
IRX4P78413 AC083906.2-201ENST00000511578 360 ntBASIC21.64■■□□□ 1.05
IRX4P78413 SMUG1P1-201ENST00000590640 811 ntBASIC21.64■■□□□ 1.05
IRX4P78413 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.64■■□□□ 1.05
IRX4P78413 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
IRX4P78413 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
IRX4P78413 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
IRX4P78413 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.63■■□□□ 1.05
IRX4P78413 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.63■■□□□ 1.05
IRX4P78413 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
IRX4P78413 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
IRX4P78413 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.63■■□□□ 1.05
IRX4P78413 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.63■■□□□ 1.05
IRX4P78413 AL121832.2-201ENST00000610979 668 ntBASIC21.63■■□□□ 1.05
IRX4P78413 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
IRX4P78413 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
IRX4P78413 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
IRX4P78413 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.63■■□□□ 1.05
IRX4P78413 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
IRX4P78413 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
IRX4P78413 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
IRX4P78413 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
IRX4P78413 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
IRX4P78413 SLC25A24-204ENST00000569674 2357 ntBASIC21.62■■□□□ 1.05
IRX4P78413 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.62■■□□□ 1.05
IRX4P78413 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
IRX4P78413 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
IRX4P78413 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.62■■□□□ 1.05
IRX4P78413 AC079140.4-201ENST00000507448 529 ntBASIC21.62■■□□□ 1.05
IRX4P78413 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
IRX4P78413 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.62■■□□□ 1.05
IRX4P78413 AC005229.4-201ENST00000610085 2198 ntBASIC21.62■■□□□ 1.05
IRX4P78413 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
IRX4P78413 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
IRX4P78413 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
IRX4P78413 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
IRX4P78413 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
IRX4P78413 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.61■■□□□ 1.05
IRX4P78413 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.61■■□□□ 1.05
IRX4P78413 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
IRX4P78413 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
IRX4P78413 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
IRX4P78413 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
IRX4P78413 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
IRX4P78413 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
IRX4P78413 MFSD11-216ENST00000590393 1141 ntBASIC21.61■■□□□ 1.05
IRX4P78413 AL050303.2-201ENST00000619798 666 ntBASIC21.61■■□□□ 1.05
IRX4P78413 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.61■■□□□ 1.05
IRX4P78413 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.61■■□□□ 1.05
IRX4P78413 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
IRX4P78413 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.6■■□□□ 1.05
IRX4P78413 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.6■■□□□ 1.05
IRX4P78413 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
IRX4P78413 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
IRX4P78413 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.6■■□□□ 1.05
IRX4P78413 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.6■■□□□ 1.05
IRX4P78413 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
IRX4P78413 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.6■■□□□ 1.05
IRX4P78413 TSPY6P-201ENST00000448518 926 ntBASIC21.6■■□□□ 1.05
IRX4P78413 KRT18P6-201ENST00000555540 1265 ntBASIC21.6■■□□□ 1.05
IRX4P78413 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.6■■□□□ 1.05
IRX4P78413 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.6■■□□□ 1.05
IRX4P78413 AC068587.7-201ENST00000641602 218 ntBASIC21.6■■□□□ 1.05
IRX4P78413 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.6■■□□□ 1.05
IRX4P78413 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.6■■□□□ 1.05
IRX4P78413 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.6■■□□□ 1.05
IRX4P78413 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
IRX4P78413 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
IRX4P78413 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
IRX4P78413 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
IRX4P78413 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
IRX4P78413 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.59■■□□□ 1.05
IRX4P78413 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.59■■□□□ 1.05
IRX4P78413 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.59■■□□□ 1.05
IRX4P78413 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
IRX4P78413 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
IRX4P78413 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
IRX4P78413 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.59■■□□□ 1.05
IRX4P78413 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.59■■□□□ 1.05
IRX4P78413 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.59■■□□□ 1.05
IRX4P78413 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.59■■□□□ 1.05
IRX4P78413 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.59■■□□□ 1.05
IRX4P78413 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
IRX4P78413 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.59■■□□□ 1.05
IRX4P78413 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
IRX4P78413 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
IRX4P78413 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.58■■□□□ 1.05
IRX4P78413 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
IRX4P78413 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
IRX4P78413 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms