Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
PRAMEP78395 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PRAMEP78395 EEF1DP3-203ENST00000566025 782 ntBASIC21.02■□□□□ 0.96
PRAMEP78395 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.02■□□□□ 0.96
PRAMEP78395 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.02■□□□□ 0.96
PRAMEP78395 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PRAMEP78395 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PRAMEP78395 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PRAMEP78395 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.02■□□□□ 0.96
PRAMEP78395 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.02■□□□□ 0.96
PRAMEP78395 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.02■□□□□ 0.95
PRAMEP78395 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
PRAMEP78395 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
PRAMEP78395 KRT87P-202ENST00000534226 1464 ntBASIC21.01■□□□□ 0.95
PRAMEP78395 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PRAMEP78395 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PRAMEP78395 AL049796.1-201ENST00000565336 1766 ntBASIC21.01■□□□□ 0.95
PRAMEP78395 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PRAMEP78395 ZNRF2P3-201ENST00000424200 374 ntBASIC21.01■□□□□ 0.95
PRAMEP78395 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.01■□□□□ 0.95
PRAMEP78395 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PRAMEP78395 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.01■□□□□ 0.95
PRAMEP78395 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.01■□□□□ 0.95
PRAMEP78395 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PRAMEP78395 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
PRAMEP78395 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
PRAMEP78395 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
PRAMEP78395 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21■□□□□ 0.95
PRAMEP78395 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21■□□□□ 0.95
PRAMEP78395 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PRAMEP78395 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
PRAMEP78395 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21■□□□□ 0.95
PRAMEP78395 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21■□□□□ 0.95
PRAMEP78395 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PRAMEP78395 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PRAMEP78395 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21■□□□□ 0.95
PRAMEP78395 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
PRAMEP78395 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21■□□□□ 0.95
PRAMEP78395 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PRAMEP78395 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PRAMEP78395 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
PRAMEP78395 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PRAMEP78395 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.99■□□□□ 0.95
PRAMEP78395 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PRAMEP78395 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.99■□□□□ 0.95
PRAMEP78395 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.99■□□□□ 0.95
PRAMEP78395 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PRAMEP78395 AC123595.1-201ENST00000440769 1046 ntBASIC20.99■□□□□ 0.95
PRAMEP78395 YBX1P1-201ENST00000445822 960 ntBASIC20.99■□□□□ 0.95
PRAMEP78395 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.99■□□□□ 0.95
PRAMEP78395 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.99■□□□□ 0.95
PRAMEP78395 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.99■□□□□ 0.95
PRAMEP78395 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.99■□□□□ 0.95
PRAMEP78395 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PRAMEP78395 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
PRAMEP78395 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.98■□□□□ 0.95
PRAMEP78395 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRAMEP78395 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRAMEP78395 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.98■□□□□ 0.95
PRAMEP78395 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.98■□□□□ 0.95
PRAMEP78395 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRAMEP78395 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRAMEP78395 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRAMEP78395 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRAMEP78395 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PRAMEP78395 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRAMEP78395 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PRAMEP78395 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PRAMEP78395 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRAMEP78395 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.97■□□□□ 0.95
PRAMEP78395 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRAMEP78395 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRAMEP78395 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PRAMEP78395 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PRAMEP78395 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRAMEP78395 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
PRAMEP78395 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRAMEP78395 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.97■□□□□ 0.95
PRAMEP78395 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
PRAMEP78395 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
PRAMEP78395 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
PRAMEP78395 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRAMEP78395 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
PRAMEP78395 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRAMEP78395 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PRAMEP78395 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
PRAMEP78395 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRAMEP78395 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
PRAMEP78395 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.96■□□□□ 0.95
PRAMEP78395 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PRAMEP78395 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.96■□□□□ 0.95
PRAMEP78395 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PRAMEP78395 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.96■□□□□ 0.95
PRAMEP78395 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRAMEP78395 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.96■□□□□ 0.95
PRAMEP78395 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRAMEP78395 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.96■□□□□ 0.95
PRAMEP78395 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRAMEP78395 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRAMEP78395 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms