Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.74■□□□□ 0.75
TRA2BP62995 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRA2BP62995 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.74■□□□□ 0.75
TRA2BP62995 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TRA2BP62995 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRA2BP62995 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRA2BP62995 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRA2BP62995 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRA2BP62995 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
TRA2BP62995 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.73■□□□□ 0.75
TRA2BP62995 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.73■□□□□ 0.75
TRA2BP62995 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.73■□□□□ 0.75
TRA2BP62995 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.73■□□□□ 0.75
TRA2BP62995 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRA2BP62995 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.73■□□□□ 0.75
TRA2BP62995 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
TRA2BP62995 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRA2BP62995 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TRA2BP62995 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRA2BP62995 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRA2BP62995 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.72■□□□□ 0.75
TRA2BP62995 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRA2BP62995 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.72■□□□□ 0.75
TRA2BP62995 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRA2BP62995 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.72■□□□□ 0.75
TRA2BP62995 AC004854.2-201ENST00000608450 1441 ntBASIC19.72■□□□□ 0.75
TRA2BP62995 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRA2BP62995 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
TRA2BP62995 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.72■□□□□ 0.75
TRA2BP62995 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.72■□□□□ 0.75
TRA2BP62995 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
TRA2BP62995 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRA2BP62995 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRA2BP62995 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRA2BP62995 AC121338.2-201ENST00000622535 1744 ntBASIC19.71■□□□□ 0.75
TRA2BP62995 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.71■□□□□ 0.75
TRA2BP62995 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
TRA2BP62995 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRA2BP62995 KRT19P1-201ENST00000405746 1186 ntBASIC19.71■□□□□ 0.75
TRA2BP62995 AC097381.1-201ENST00000429019 1296 ntBASIC19.71■□□□□ 0.75
TRA2BP62995 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRA2BP62995 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.71■□□□□ 0.75
TRA2BP62995 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRA2BP62995 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRA2BP62995 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.71■□□□□ 0.75
TRA2BP62995 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRA2BP62995 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRA2BP62995 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRA2BP62995 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRA2BP62995 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRA2BP62995 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRA2BP62995 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRA2BP62995 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
TRA2BP62995 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRA2BP62995 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRA2BP62995 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRA2BP62995 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRA2BP62995 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
TRA2BP62995 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRA2BP62995 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
TRA2BP62995 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
TRA2BP62995 AC245052.3-201ENST00000450182 901 ntBASIC19.7■□□□□ 0.74
TRA2BP62995 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.7■□□□□ 0.74
TRA2BP62995 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.7■□□□□ 0.74
TRA2BP62995 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.7■□□□□ 0.74
TRA2BP62995 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.7■□□□□ 0.74
TRA2BP62995 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.7■□□□□ 0.74
TRA2BP62995 SLC7A5P1-201ENST00000568957 537 ntBASIC19.7■□□□□ 0.74
TRA2BP62995 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.7■□□□□ 0.74
TRA2BP62995 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRA2BP62995 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRA2BP62995 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRA2BP62995 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRA2BP62995 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRA2BP62995 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.69■□□□□ 0.74
TRA2BP62995 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRA2BP62995 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.69■□□□□ 0.74
TRA2BP62995 AC006128.1-201ENST00000624704 1661 ntBASIC19.69■□□□□ 0.74
TRA2BP62995 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRA2BP62995 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.69■□□□□ 0.74
TRA2BP62995 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.69■□□□□ 0.74
TRA2BP62995 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.69■□□□□ 0.74
TRA2BP62995 MIR6821-201ENST00000617625 74 ntBASIC19.69■□□□□ 0.74
TRA2BP62995 RARRES2P11-201ENST00000635158 484 ntBASIC19.69■□□□□ 0.74
TRA2BP62995 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.69■□□□□ 0.74
TRA2BP62995 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRA2BP62995 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRA2BP62995 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRA2BP62995 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRA2BP62995 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRA2BP62995 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.68■□□□□ 0.74
TRA2BP62995 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.68■□□□□ 0.74
TRA2BP62995 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.68■□□□□ 0.74
TRA2BP62995 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.68■□□□□ 0.74
TRA2BP62995 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRA2BP62995 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRA2BP62995 AC034268.1-201ENST00000441047 882 ntBASIC19.68■□□□□ 0.74
TRA2BP62995 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.68■□□□□ 0.74
TRA2BP62995 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
TRA2BP62995 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms