Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPS4XP62701 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPS4XP62701 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RPS4XP62701 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPS4XP62701 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RPS4XP62701 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPS4XP62701 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPS4XP62701 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPS4XP62701 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.88■□□□□ 0.61
RPS4XP62701 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.87■□□□□ 0.61
RPS4XP62701 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.87■□□□□ 0.61
RPS4XP62701 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RPS4XP62701 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RPS4XP62701 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RPS4XP62701 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.87■□□□□ 0.61
RPS4XP62701 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.87■□□□□ 0.61
RPS4XP62701 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.87■□□□□ 0.61
RPS4XP62701 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.87■□□□□ 0.61
RPS4XP62701 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.87■□□□□ 0.61
RPS4XP62701 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.87■□□□□ 0.61
RPS4XP62701 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.87■□□□□ 0.61
RPS4XP62701 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RPS4XP62701 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.87■□□□□ 0.61
RPS4XP62701 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.87■□□□□ 0.61
RPS4XP62701 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.87■□□□□ 0.61
RPS4XP62701 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.87■□□□□ 0.61
RPS4XP62701 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.87■□□□□ 0.61
RPS4XP62701 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.87■□□□□ 0.61
RPS4XP62701 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RPS4XP62701 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RPS4XP62701 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPS4XP62701 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RPS4XP62701 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPS4XP62701 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
RPS4XP62701 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.86■□□□□ 0.61
RPS4XP62701 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
RPS4XP62701 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPS4XP62701 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RPS4XP62701 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RPS4XP62701 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPS4XP62701 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RPS4XP62701 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.86■□□□□ 0.61
RPS4XP62701 EEF1DP3-203ENST00000566025 782 ntBASIC18.86■□□□□ 0.61
RPS4XP62701 TERF1P2-201ENST00000583350 1212 ntBASIC18.86■□□□□ 0.61
RPS4XP62701 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RPS4XP62701 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.86■□□□□ 0.61
RPS4XP62701 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPS4XP62701 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPS4XP62701 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RPS4XP62701 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPS4XP62701 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPS4XP62701 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.85■□□□□ 0.61
RPS4XP62701 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPS4XP62701 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPS4XP62701 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RPS4XP62701 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RPS4XP62701 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.85■□□□□ 0.61
RPS4XP62701 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.85■□□□□ 0.61
RPS4XP62701 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPS4XP62701 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPS4XP62701 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RPS4XP62701 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPS4XP62701 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPS4XP62701 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.85■□□□□ 0.61
RPS4XP62701 AC004911.1-201ENST00000416316 871 ntBASIC18.85■□□□□ 0.61
RPS4XP62701 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.85■□□□□ 0.61
RPS4XP62701 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.85■□□□□ 0.61
RPS4XP62701 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RPS4XP62701 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.85■□□□□ 0.61
RPS4XP62701 AC053503.5-201ENST00000601508 636 ntBASIC18.85■□□□□ 0.61
RPS4XP62701 AC092437.1-201ENST00000624794 1048 ntBASIC18.85■□□□□ 0.61
RPS4XP62701 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.85■□□□□ 0.61
RPS4XP62701 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
RPS4XP62701 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
RPS4XP62701 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.85■□□□□ 0.61
RPS4XP62701 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
RPS4XP62701 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPS4XP62701 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RPS4XP62701 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.84■□□□□ 0.61
RPS4XP62701 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RPS4XP62701 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RPS4XP62701 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPS4XP62701 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RPS4XP62701 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.84■□□□□ 0.61
RPS4XP62701 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPS4XP62701 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPS4XP62701 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.84■□□□□ 0.61
RPS4XP62701 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPS4XP62701 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.84■□□□□ 0.61
RPS4XP62701 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPS4XP62701 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.84■□□□□ 0.61
RPS4XP62701 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPS4XP62701 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
RPS4XP62701 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPS4XP62701 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RPS4XP62701 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPS4XP62701 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RPS4XP62701 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPS4XP62701 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.83■□□□□ 0.61
RPS4XP62701 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms