Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.7■□□□□ 0.9
CLDN2P57739 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.7■□□□□ 0.9
CLDN2P57739 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN2P57739 AL162412.1-201ENST00000567129 965 ntBASIC20.7■□□□□ 0.9
CLDN2P57739 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.7■□□□□ 0.9
CLDN2P57739 TMEM191A-211ENST00000637163 1067 ntBASIC20.7■□□□□ 0.9
CLDN2P57739 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN2P57739 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN2P57739 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN2P57739 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN2P57739 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN2P57739 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN2P57739 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN2P57739 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CLDN2P57739 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.69■□□□□ 0.9
CLDN2P57739 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN2P57739 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN2P57739 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN2P57739 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN2P57739 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.69■□□□□ 0.9
CLDN2P57739 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN2P57739 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.69■□□□□ 0.9
CLDN2P57739 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.69■□□□□ 0.9
CLDN2P57739 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN2P57739 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN2P57739 AC091799.1-201ENST00000422823 811 ntBASIC20.69■□□□□ 0.9
CLDN2P57739 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.69■□□□□ 0.9
CLDN2P57739 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.69■□□□□ 0.9
CLDN2P57739 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.69■□□□□ 0.9
CLDN2P57739 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.69■□□□□ 0.9
CLDN2P57739 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.69■□□□□ 0.9
CLDN2P57739 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.69■□□□□ 0.9
CLDN2P57739 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN2P57739 AC092118.2-201ENST00000613495 667 ntBASIC20.69■□□□□ 0.9
CLDN2P57739 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN2P57739 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN2P57739 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.69■□□□□ 0.9
CLDN2P57739 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN2P57739 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN2P57739 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN2P57739 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN2P57739 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CLDN2P57739 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN2P57739 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN2P57739 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
CLDN2P57739 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN2P57739 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN2P57739 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN2P57739 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN2P57739 AC245052.3-201ENST00000450182 901 ntBASIC20.68■□□□□ 0.9
CLDN2P57739 RNA5SP413-201ENST00000516373 109 ntBASIC20.68■□□□□ 0.9
CLDN2P57739 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.68■□□□□ 0.9
CLDN2P57739 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN2P57739 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN2P57739 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN2P57739 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN2P57739 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.68■□□□□ 0.9
CLDN2P57739 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN2P57739 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN2P57739 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN2P57739 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN2P57739 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CLDN2P57739 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN2P57739 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN2P57739 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.67■□□□□ 0.9
CLDN2P57739 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.67■□□□□ 0.9
CLDN2P57739 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.67■□□□□ 0.9
CLDN2P57739 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN2P57739 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN2P57739 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN2P57739 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN2P57739 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CLDN2P57739 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.67■□□□□ 0.9
CLDN2P57739 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CLDN2P57739 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN2P57739 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.67■□□□□ 0.9
CLDN2P57739 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN2P57739 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.66■□□□□ 0.9
CLDN2P57739 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN2P57739 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CLDN2P57739 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.66■□□□□ 0.9
CLDN2P57739 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.66■□□□□ 0.9
CLDN2P57739 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN2P57739 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.66■□□□□ 0.9
CLDN2P57739 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.66■□□□□ 0.9
CLDN2P57739 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN2P57739 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN2P57739 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN2P57739 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
CLDN2P57739 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLDN2P57739 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CLDN2P57739 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CLDN2P57739 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLDN2P57739 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLDN2P57739 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLDN2P57739 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.65■□□□□ 0.9
CLDN2P57739 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CLDN2P57739 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.9
CLDN2P57739 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLDN2P57739 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms