Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.13■□□□□ 0.81
CLDN6P56747 AC243732.1-201ENST00000612648 864 ntBASIC20.13■□□□□ 0.81
CLDN6P56747 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN6P56747 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN6P56747 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN6P56747 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.13■□□□□ 0.81
CLDN6P56747 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN6P56747 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN6P56747 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN6P56747 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN6P56747 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN6P56747 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN6P56747 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.12■□□□□ 0.81
CLDN6P56747 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN6P56747 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN6P56747 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN6P56747 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN6P56747 UBE2SP1-201ENST00000450587 669 ntBASIC20.12■□□□□ 0.81
CLDN6P56747 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN6P56747 FAM197Y4-202ENST00000622692 608 ntBASIC20.12■□□□□ 0.81
CLDN6P56747 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.12■□□□□ 0.81
CLDN6P56747 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN6P56747 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN6P56747 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN6P56747 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN6P56747 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN6P56747 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
CLDN6P56747 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN6P56747 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN6P56747 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN6P56747 RPPH1-201ENST00000516869 333 ntBASIC20.11■□□□□ 0.81
CLDN6P56747 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CLDN6P56747 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN6P56747 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN6P56747 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN6P56747 AC139530.1-201ENST00000575312 1977 ntBASIC20.1■□□□□ 0.81
CLDN6P56747 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.1■□□□□ 0.81
CLDN6P56747 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN6P56747 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.1■□□□□ 0.81
CLDN6P56747 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN6P56747 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CLDN6P56747 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN6P56747 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CLDN6P56747 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN6P56747 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.1■□□□□ 0.81
CLDN6P56747 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.1■□□□□ 0.81
CLDN6P56747 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.1■□□□□ 0.81
CLDN6P56747 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN6P56747 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.1■□□□□ 0.81
CLDN6P56747 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN6P56747 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN6P56747 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN6P56747 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.1■□□□□ 0.81
CLDN6P56747 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CLDN6P56747 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN6P56747 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.1■□□□□ 0.81
CLDN6P56747 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.09■□□□□ 0.81
CLDN6P56747 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN6P56747 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CLDN6P56747 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN6P56747 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN6P56747 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN6P56747 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN6P56747 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
CLDN6P56747 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN6P56747 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN6P56747 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
CLDN6P56747 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.09■□□□□ 0.81
CLDN6P56747 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.09■□□□□ 0.81
CLDN6P56747 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.09■□□□□ 0.81
CLDN6P56747 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.09■□□□□ 0.81
CLDN6P56747 Z99916.2-201ENST00000604037 246 ntBASIC20.09■□□□□ 0.81
CLDN6P56747 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.09■□□□□ 0.81
CLDN6P56747 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN6P56747 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.09■□□□□ 0.81
CLDN6P56747 AC133561.1-201ENST00000568600 2415 ntBASIC20.08■□□□□ 0.81
CLDN6P56747 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN6P56747 AC003102.1-202ENST00000563394 1796 ntBASIC20.08■□□□□ 0.81
CLDN6P56747 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN6P56747 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN6P56747 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN6P56747 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN6P56747 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN6P56747 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN6P56747 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN6P56747 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN6P56747 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.08■□□□□ 0.81
CLDN6P56747 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.08■□□□□ 0.81
CLDN6P56747 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN6P56747 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
CLDN6P56747 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.08■□□□□ 0.81
CLDN6P56747 SNORA78-201ENST00000459373 127 ntBASIC20.08■□□□□ 0.81
CLDN6P56747 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
CLDN6P56747 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN6P56747 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN6P56747 AC060766.5-201ENST00000590539 871 ntBASIC20.08■□□□□ 0.81
CLDN6P56747 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.08■□□□□ 0.81
CLDN6P56747 CYP2T3P-201ENST00000601990 817 ntBASIC20.08■□□□□ 0.81
CLDN6P56747 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.08■□□□□ 0.81
CLDN6P56747 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.08■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms