Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXG1P55316 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
FOXG1P55316 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FOXG1P55316 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
FOXG1P55316 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.39■□□□□ 0.53
FOXG1P55316 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FOXG1P55316 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
FOXG1P55316 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FOXG1P55316 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FOXG1P55316 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FOXG1P55316 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FOXG1P55316 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
FOXG1P55316 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FOXG1P55316 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FOXG1P55316 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
FOXG1P55316 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.39■□□□□ 0.53
FOXG1P55316 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.39■□□□□ 0.53
FOXG1P55316 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXG1P55316 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.38■□□□□ 0.53
FOXG1P55316 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
FOXG1P55316 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXG1P55316 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.38■□□□□ 0.53
FOXG1P55316 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.38■□□□□ 0.53
FOXG1P55316 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
FOXG1P55316 CROCCP5-201ENST00000436658 830 ntBASIC18.38■□□□□ 0.53
FOXG1P55316 AC026185.1-201ENST00000445748 174 ntBASIC18.38■□□□□ 0.53
FOXG1P55316 TERF1P5-201ENST00000477545 1207 ntBASIC18.38■□□□□ 0.53
FOXG1P55316 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXG1P55316 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.38■□□□□ 0.53
FOXG1P55316 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
FOXG1P55316 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
FOXG1P55316 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.38■□□□□ 0.53
FOXG1P55316 RBM17P2-201ENST00000616397 1405 ntBASIC18.38■□□□□ 0.53
FOXG1P55316 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXG1P55316 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.38■□□□□ 0.53
FOXG1P55316 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXG1P55316 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.38■□□□□ 0.53
FOXG1P55316 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXG1P55316 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXG1P55316 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.37■□□□□ 0.53
FOXG1P55316 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXG1P55316 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
FOXG1P55316 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.37■□□□□ 0.53
FOXG1P55316 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.37■□□□□ 0.53
FOXG1P55316 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
FOXG1P55316 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.37■□□□□ 0.53
FOXG1P55316 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.37■□□□□ 0.53
FOXG1P55316 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.37■□□□□ 0.53
FOXG1P55316 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.37■□□□□ 0.53
FOXG1P55316 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXG1P55316 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
FOXG1P55316 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.37■□□□□ 0.53
FOXG1P55316 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
FOXG1P55316 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
FOXG1P55316 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.37■□□□□ 0.53
FOXG1P55316 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FOXG1P55316 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FOXG1P55316 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
FOXG1P55316 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FOXG1P55316 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
FOXG1P55316 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
FOXG1P55316 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FOXG1P55316 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.36■□□□□ 0.53
FOXG1P55316 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FOXG1P55316 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
FOXG1P55316 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.36■□□□□ 0.53
FOXG1P55316 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.36■□□□□ 0.53
FOXG1P55316 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
FOXG1P55316 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.36■□□□□ 0.53
FOXG1P55316 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.36■□□□□ 0.53
FOXG1P55316 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.36■□□□□ 0.53
FOXG1P55316 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.36■□□□□ 0.53
FOXG1P55316 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.36■□□□□ 0.53
FOXG1P55316 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
FOXG1P55316 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FOXG1P55316 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
FOXG1P55316 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.35■□□□□ 0.53
FOXG1P55316 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.35■□□□□ 0.53
FOXG1P55316 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FOXG1P55316 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.35■□□□□ 0.53
FOXG1P55316 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.35■□□□□ 0.53
FOXG1P55316 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.35■□□□□ 0.53
FOXG1P55316 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.35■□□□□ 0.53
FOXG1P55316 AL050303.2-201ENST00000619798 666 ntBASIC18.35■□□□□ 0.53
FOXG1P55316 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FOXG1P55316 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FOXG1P55316 AL024507.2-201ENST00000606070 2574 ntBASIC18.35■□□□□ 0.53
FOXG1P55316 AF106564.1-201ENST00000607058 2553 ntBASIC18.35■□□□□ 0.53
FOXG1P55316 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FOXG1P55316 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXG1P55316 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXG1P55316 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FOXG1P55316 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXG1P55316 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
FOXG1P55316 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXG1P55316 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
FOXG1P55316 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
FOXG1P55316 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
FOXG1P55316 MIR663A-201ENST00000385250 93 ntBASIC18.34■□□□□ 0.53
FOXG1P55316 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms