Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH13P55290 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.43■□□□□ 0.86
CDH13P55290 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
CDH13P55290 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.43■□□□□ 0.86
CDH13P55290 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.42■□□□□ 0.86
CDH13P55290 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CDH13P55290 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CDH13P55290 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CDH13P55290 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
CDH13P55290 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.42■□□□□ 0.86
CDH13P55290 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CDH13P55290 MIR572-201ENST00000384983 95 ntBASIC20.42■□□□□ 0.86
CDH13P55290 MIR939-201ENST00000401314 82 ntBASIC20.42■□□□□ 0.86
CDH13P55290 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDH13P55290 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.42■□□□□ 0.86
CDH13P55290 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.42■□□□□ 0.86
CDH13P55290 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDH13P55290 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.42■□□□□ 0.86
CDH13P55290 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDH13P55290 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CDH13P55290 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CDH13P55290 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDH13P55290 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDH13P55290 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH13P55290 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.41■□□□□ 0.86
CDH13P55290 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.41■□□□□ 0.86
CDH13P55290 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDH13P55290 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CDH13P55290 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH13P55290 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH13P55290 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.41■□□□□ 0.86
CDH13P55290 AC092667.1-201ENST00000434301 2586 ntBASIC20.41■□□□□ 0.86
CDH13P55290 RASA4CP-201ENST00000424092 1398 ntBASIC20.41■□□□□ 0.86
CDH13P55290 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDH13P55290 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDH13P55290 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CDH13P55290 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH13P55290 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.41■□□□□ 0.86
CDH13P55290 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.41■□□□□ 0.86
CDH13P55290 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CDH13P55290 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDH13P55290 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDH13P55290 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDH13P55290 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CDH13P55290 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDH13P55290 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDH13P55290 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CDH13P55290 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.4■□□□□ 0.86
CDH13P55290 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.4■□□□□ 0.86
CDH13P55290 AL031432.3-201ENST00000607698 485 ntBASIC20.4■□□□□ 0.86
CDH13P55290 AL136967.2-201ENST00000623968 743 ntBASIC20.4■□□□□ 0.86
CDH13P55290 AC006128.1-201ENST00000624704 1661 ntBASIC20.4■□□□□ 0.86
CDH13P55290 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDH13P55290 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDH13P55290 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDH13P55290 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDH13P55290 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CDH13P55290 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
CDH13P55290 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
CDH13P55290 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDH13P55290 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDH13P55290 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDH13P55290 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDH13P55290 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.39■□□□□ 0.85
CDH13P55290 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.39■□□□□ 0.85
CDH13P55290 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.39■□□□□ 0.85
CDH13P55290 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDH13P55290 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDH13P55290 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.38■□□□□ 0.85
CDH13P55290 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDH13P55290 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH13P55290 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.38■□□□□ 0.85
CDH13P55290 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
CDH13P55290 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH13P55290 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.38■□□□□ 0.85
CDH13P55290 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.38■□□□□ 0.85
CDH13P55290 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH13P55290 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH13P55290 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.38■□□□□ 0.85
CDH13P55290 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.38■□□□□ 0.85
CDH13P55290 AC091305.1-201ENST00000479476 895 ntBASIC20.38■□□□□ 0.85
CDH13P55290 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.38■□□□□ 0.85
CDH13P55290 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.38■□□□□ 0.85
CDH13P55290 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH13P55290 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CDH13P55290 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH13P55290 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH13P55290 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH13P55290 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH13P55290 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDH13P55290 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDH13P55290 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDH13P55290 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.37■□□□□ 0.85
CDH13P55290 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDH13P55290 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDH13P55290 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDH13P55290 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.37■□□□□ 0.85
CDH13P55290 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.37■□□□□ 0.85
CDH13P55290 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDH13P55290 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms