Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 RBM17P2-201ENST00000616397 1405 ntBASIC15.34■□□□□ 0.05
APOC4P55056 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
APOC4P55056 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
APOC4P55056 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
APOC4P55056 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
APOC4P55056 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC15.33■□□□□ 0.04
APOC4P55056 AC105036.2-201ENST00000569468 176 ntBASIC15.33■□□□□ 0.04
APOC4P55056 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
APOC4P55056 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
APOC4P55056 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
APOC4P55056 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
APOC4P55056 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
APOC4P55056 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC15.33■□□□□ 0.04
APOC4P55056 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
APOC4P55056 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
APOC4P55056 STX5-203ENST00000394690 1568 ntTSL 5 BASIC15.32■□□□□ 0.04
APOC4P55056 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
APOC4P55056 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
APOC4P55056 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
APOC4P55056 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
APOC4P55056 NARF-205ENST00000412079 1760 ntTSL 5 BASIC15.32■□□□□ 0.04
APOC4P55056 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
APOC4P55056 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
APOC4P55056 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
APOC4P55056 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC15.32■□□□□ 0.04
APOC4P55056 APTR-203ENST00000430801 583 ntTSL 5 BASIC15.32■□□□□ 0.04
APOC4P55056 CDV3P1-201ENST00000471403 739 ntBASIC15.32■□□□□ 0.04
APOC4P55056 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC15.32■□□□□ 0.04
APOC4P55056 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
APOC4P55056 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC15.32■□□□□ 0.04
APOC4P55056 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC15.32■□□□□ 0.04
APOC4P55056 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
APOC4P55056 AC068473.5-201ENST00000616428 2072 ntBASIC15.32■□□□□ 0.04
APOC4P55056 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
APOC4P55056 AC068338.2-201ENST00000563278 1430 ntBASIC15.32■□□□□ 0.04
APOC4P55056 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC15.32■□□□□ 0.04
APOC4P55056 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
APOC4P55056 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
APOC4P55056 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
APOC4P55056 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC15.32■□□□□ 0.04
APOC4P55056 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
APOC4P55056 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
APOC4P55056 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
APOC4P55056 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
APOC4P55056 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
APOC4P55056 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
APOC4P55056 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
APOC4P55056 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC15.31■□□□□ 0.04
APOC4P55056 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
APOC4P55056 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
APOC4P55056 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC15.31■□□□□ 0.04
APOC4P55056 TSPY6P-201ENST00000448518 926 ntBASIC15.31■□□□□ 0.04
APOC4P55056 CD44-222ENST00000526025 1052 ntTSL 2 BASIC15.31■□□□□ 0.04
APOC4P55056 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC15.31■□□□□ 0.04
APOC4P55056 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
APOC4P55056 AL050303.2-201ENST00000619798 666 ntBASIC15.31■□□□□ 0.04
APOC4P55056 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
APOC4P55056 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC15.31■□□□□ 0.04
APOC4P55056 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
APOC4P55056 ECEL1P1-201ENST00000373592 1742 ntBASIC15.31■□□□□ 0.04
APOC4P55056 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
APOC4P55056 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC15.31■□□□□ 0.04
APOC4P55056 AC026471.6-201ENST00000622954 1905 ntBASIC15.31■□□□□ 0.04
APOC4P55056 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
APOC4P55056 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
APOC4P55056 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
APOC4P55056 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
APOC4P55056 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
APOC4P55056 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC15.31■□□□□ 0.04
APOC4P55056 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
APOC4P55056 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
APOC4P55056 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
APOC4P55056 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
APOC4P55056 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
APOC4P55056 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
APOC4P55056 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
APOC4P55056 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
APOC4P55056 METTL15-202ENST00000403099 795 ntTSL 5 BASIC15.3■□□□□ 0.04
APOC4P55056 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
APOC4P55056 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
APOC4P55056 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
APOC4P55056 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC15.3■□□□□ 0.04
APOC4P55056 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
APOC4P55056 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
APOC4P55056 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
APOC4P55056 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC15.3■□□□□ 0.04
APOC4P55056 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
APOC4P55056 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
APOC4P55056 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC15.3■□□□□ 0.04
APOC4P55056 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC15.3■□□□□ 0.04
APOC4P55056 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
APOC4P55056 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
APOC4P55056 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
APOC4P55056 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
APOC4P55056 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
APOC4P55056 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
APOC4P55056 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
APOC4P55056 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
APOC4P55056 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
APOC4P55056 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms