Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
EFNA3P52797 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EFNA3P52797 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.63■□□□□ 0.73
EFNA3P52797 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EFNA3P52797 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.63■□□□□ 0.73
EFNA3P52797 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EFNA3P52797 AC013268.1-206ENST00000638368 961 ntBASIC19.63■□□□□ 0.73
EFNA3P52797 AC112229.1-201ENST00000639295 961 ntBASIC19.63■□□□□ 0.73
EFNA3P52797 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EFNA3P52797 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EFNA3P52797 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
EFNA3P52797 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EFNA3P52797 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EFNA3P52797 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.62■□□□□ 0.73
EFNA3P52797 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EFNA3P52797 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
EFNA3P52797 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
EFNA3P52797 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.62■□□□□ 0.73
EFNA3P52797 AC007322.4-201ENST00000509611 723 ntBASIC19.62■□□□□ 0.73
EFNA3P52797 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.62■□□□□ 0.73
EFNA3P52797 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
EFNA3P52797 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EFNA3P52797 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
EFNA3P52797 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.62■□□□□ 0.73
EFNA3P52797 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
EFNA3P52797 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EFNA3P52797 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
EFNA3P52797 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
EFNA3P52797 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
EFNA3P52797 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
EFNA3P52797 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.61■□□□□ 0.73
EFNA3P52797 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
EFNA3P52797 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
EFNA3P52797 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
EFNA3P52797 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
EFNA3P52797 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
EFNA3P52797 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
EFNA3P52797 CYP2T1P-201ENST00000432607 1285 ntBASIC19.61■□□□□ 0.73
EFNA3P52797 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.61■□□□□ 0.73
EFNA3P52797 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
EFNA3P52797 AL109923.1-201ENST00000618799 583 ntBASIC19.61■□□□□ 0.73
EFNA3P52797 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.61■□□□□ 0.73
EFNA3P52797 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.61■□□□□ 0.73
EFNA3P52797 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
EFNA3P52797 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
EFNA3P52797 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.61■□□□□ 0.73
EFNA3P52797 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.61■□□□□ 0.73
EFNA3P52797 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
EFNA3P52797 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EFNA3P52797 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.6■□□□□ 0.73
EFNA3P52797 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EFNA3P52797 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
EFNA3P52797 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EFNA3P52797 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.6■□□□□ 0.73
EFNA3P52797 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
EFNA3P52797 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.6■□□□□ 0.73
EFNA3P52797 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.6■□□□□ 0.73
EFNA3P52797 AC083906.2-201ENST00000511578 360 ntBASIC19.6■□□□□ 0.73
EFNA3P52797 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.6■□□□□ 0.73
EFNA3P52797 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.6■□□□□ 0.73
EFNA3P52797 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
EFNA3P52797 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
EFNA3P52797 AC120498.10-201ENST00000621827 505 ntBASIC19.6■□□□□ 0.73
EFNA3P52797 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
EFNA3P52797 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.6■□□□□ 0.73
EFNA3P52797 FBXW4P1-201ENST00000426721 2239 ntBASIC19.6■□□□□ 0.73
EFNA3P52797 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
EFNA3P52797 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EFNA3P52797 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.6■□□□□ 0.73
EFNA3P52797 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
EFNA3P52797 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
EFNA3P52797 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
EFNA3P52797 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.59■□□□□ 0.73
EFNA3P52797 AC243732.1-201ENST00000612648 864 ntBASIC19.59■□□□□ 0.73
EFNA3P52797 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
EFNA3P52797 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
EFNA3P52797 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.59■□□□□ 0.73
EFNA3P52797 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
EFNA3P52797 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.59■□□□□ 0.73
EFNA3P52797 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.59■□□□□ 0.73
EFNA3P52797 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.58■□□□□ 0.73
EFNA3P52797 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.58■□□□□ 0.73
EFNA3P52797 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
EFNA3P52797 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
EFNA3P52797 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
EFNA3P52797 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
EFNA3P52797 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.58■□□□□ 0.73
EFNA3P52797 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
EFNA3P52797 GPX1P1-201ENST00000388829 606 ntBASIC19.58■□□□□ 0.72
EFNA3P52797 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.58■□□□□ 0.72
EFNA3P52797 TSPY6P-201ENST00000448518 926 ntBASIC19.58■□□□□ 0.72
EFNA3P52797 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
EFNA3P52797 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.58■□□□□ 0.72
EFNA3P52797 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.58■□□□□ 0.72
EFNA3P52797 AC016405.3-201ENST00000607710 860 ntBASIC19.58■□□□□ 0.72
EFNA3P52797 AL121832.2-201ENST00000610979 668 ntBASIC19.58■□□□□ 0.72
EFNA3P52797 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
EFNA3P52797 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
EFNA3P52797 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
EFNA3P52797 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms