Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CSNK1DP48730 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
CSNK1DP48730 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CSNK1DP48730 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.06■□□□□ 0.96
CSNK1DP48730 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CSNK1DP48730 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CSNK1DP48730 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.06■□□□□ 0.96
CSNK1DP48730 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CSNK1DP48730 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.06■□□□□ 0.96
CSNK1DP48730 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
CSNK1DP48730 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CSNK1DP48730 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CSNK1DP48730 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
CSNK1DP48730 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.05■□□□□ 0.96
CSNK1DP48730 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CSNK1DP48730 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CSNK1DP48730 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
CSNK1DP48730 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CSNK1DP48730 AC091799.1-201ENST00000422823 811 ntBASIC21.05■□□□□ 0.96
CSNK1DP48730 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CSNK1DP48730 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
CSNK1DP48730 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.05■□□□□ 0.96
CSNK1DP48730 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.05■□□□□ 0.96
CSNK1DP48730 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.04■□□□□ 0.96
CSNK1DP48730 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CSNK1DP48730 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.04■□□□□ 0.96
CSNK1DP48730 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CSNK1DP48730 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.04■□□□□ 0.96
CSNK1DP48730 AC090192.1-201ENST00000517740 490 ntBASIC21.04■□□□□ 0.96
CSNK1DP48730 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.04■□□□□ 0.96
CSNK1DP48730 AL591742.1-201ENST00000604433 565 ntBASIC21.04■□□□□ 0.96
CSNK1DP48730 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.04■□□□□ 0.96
CSNK1DP48730 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.04■□□□□ 0.96
CSNK1DP48730 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CSNK1DP48730 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.04■□□□□ 0.96
CSNK1DP48730 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CSNK1DP48730 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
CSNK1DP48730 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CSNK1DP48730 AC068338.2-201ENST00000563278 1430 ntBASIC21.04■□□□□ 0.96
CSNK1DP48730 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CSNK1DP48730 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CSNK1DP48730 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.03■□□□□ 0.96
CSNK1DP48730 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.03■□□□□ 0.96
CSNK1DP48730 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CSNK1DP48730 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CSNK1DP48730 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
CSNK1DP48730 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CSNK1DP48730 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.03■□□□□ 0.96
CSNK1DP48730 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.03■□□□□ 0.96
CSNK1DP48730 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
CSNK1DP48730 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CSNK1DP48730 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CSNK1DP48730 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CSNK1DP48730 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.03■□□□□ 0.96
CSNK1DP48730 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CSNK1DP48730 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CSNK1DP48730 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CSNK1DP48730 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CSNK1DP48730 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CSNK1DP48730 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CSNK1DP48730 CROCCP5-201ENST00000436658 830 ntBASIC21.02■□□□□ 0.96
CSNK1DP48730 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CSNK1DP48730 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.02■□□□□ 0.96
CSNK1DP48730 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.02■□□□□ 0.96
CSNK1DP48730 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CSNK1DP48730 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.02■□□□□ 0.95
CSNK1DP48730 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.02■□□□□ 0.95
CSNK1DP48730 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CSNK1DP48730 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.01■□□□□ 0.95
CSNK1DP48730 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CSNK1DP48730 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.01■□□□□ 0.95
CSNK1DP48730 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CSNK1DP48730 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSNK1DP48730 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSNK1DP48730 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSNK1DP48730 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.01■□□□□ 0.95
CSNK1DP48730 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CSNK1DP48730 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CSNK1DP48730 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CSNK1DP48730 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSNK1DP48730 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CSNK1DP48730 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CSNK1DP48730 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.01■□□□□ 0.95
CSNK1DP48730 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21■□□□□ 0.95
CSNK1DP48730 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CSNK1DP48730 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CSNK1DP48730 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CSNK1DP48730 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CSNK1DP48730 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CSNK1DP48730 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21■□□□□ 0.95
CSNK1DP48730 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21■□□□□ 0.95
CSNK1DP48730 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21■□□□□ 0.95
CSNK1DP48730 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CSNK1DP48730 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21■□□□□ 0.95
CSNK1DP48730 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21■□□□□ 0.95
CSNK1DP48730 AC005181.1-201ENST00000604782 1256 ntBASIC21■□□□□ 0.95
CSNK1DP48730 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CSNK1DP48730 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CSNK1DP48730 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
CSNK1DP48730 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms