Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
RFC3P40938 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFC3P40938 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.11■□□□□ 0.65
RFC3P40938 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.11■□□□□ 0.65
RFC3P40938 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFC3P40938 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.11■□□□□ 0.65
RFC3P40938 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.11■□□□□ 0.65
RFC3P40938 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.11■□□□□ 0.65
RFC3P40938 AC142086.2-201ENST00000569753 217 ntBASIC19.11■□□□□ 0.65
RFC3P40938 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.11■□□□□ 0.65
RFC3P40938 AC016405.3-201ENST00000607710 860 ntBASIC19.11■□□□□ 0.65
RFC3P40938 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.11■□□□□ 0.65
RFC3P40938 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFC3P40938 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFC3P40938 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFC3P40938 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RFC3P40938 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.1■□□□□ 0.65
RFC3P40938 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
RFC3P40938 GUSBP5-202ENST00000510805 1989 ntBASIC19.1■□□□□ 0.65
RFC3P40938 C11orf96-202ENST00000528572 1834 ntBASIC19.1■□□□□ 0.65
RFC3P40938 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
RFC3P40938 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.1■□□□□ 0.65
RFC3P40938 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.1■□□□□ 0.65
RFC3P40938 AC133552.2-202ENST00000575694 574 ntBASIC19.1■□□□□ 0.65
RFC3P40938 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
RFC3P40938 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.1■□□□□ 0.65
RFC3P40938 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFC3P40938 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFC3P40938 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFC3P40938 KRT16P2-201ENST00000414673 1423 ntBASIC19.09■□□□□ 0.65
RFC3P40938 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RFC3P40938 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.09■□□□□ 0.65
RFC3P40938 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
RFC3P40938 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.09■□□□□ 0.65
RFC3P40938 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RFC3P40938 AC093787.1-201ENST00000450396 207 ntBASIC19.09■□□□□ 0.65
RFC3P40938 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.09■□□□□ 0.65
RFC3P40938 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.09■□□□□ 0.65
RFC3P40938 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.09■□□□□ 0.65
RFC3P40938 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RFC3P40938 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.09■□□□□ 0.65
RFC3P40938 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFC3P40938 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
RFC3P40938 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFC3P40938 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RFC3P40938 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.09■□□□□ 0.65
RFC3P40938 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
RFC3P40938 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RFC3P40938 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.08■□□□□ 0.65
RFC3P40938 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RFC3P40938 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RFC3P40938 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RFC3P40938 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RFC3P40938 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
RFC3P40938 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RFC3P40938 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RFC3P40938 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
RFC3P40938 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.08■□□□□ 0.64
RFC3P40938 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
RFC3P40938 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RFC3P40938 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
RFC3P40938 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.08■□□□□ 0.64
RFC3P40938 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RFC3P40938 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RFC3P40938 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.08■□□□□ 0.64
RFC3P40938 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RFC3P40938 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.08■□□□□ 0.64
RFC3P40938 RBM17P2-201ENST00000616397 1405 ntBASIC19.08■□□□□ 0.64
RFC3P40938 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RFC3P40938 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFC3P40938 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFC3P40938 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFC3P40938 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RFC3P40938 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RFC3P40938 AC007322.4-201ENST00000509611 723 ntBASIC19.07■□□□□ 0.64
RFC3P40938 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RFC3P40938 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RFC3P40938 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.07■□□□□ 0.64
RFC3P40938 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RFC3P40938 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFC3P40938 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.07■□□□□ 0.64
RFC3P40938 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.07■□□□□ 0.64
RFC3P40938 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
RFC3P40938 AC008694.1-202ENST00000636953 945 ntBASIC19.07■□□□□ 0.64
RFC3P40938 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFC3P40938 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RFC3P40938 AL117328.2-201ENST00000624617 1940 ntBASIC19.07■□□□□ 0.64
RFC3P40938 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RFC3P40938 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.07■□□□□ 0.64
RFC3P40938 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFC3P40938 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFC3P40938 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFC3P40938 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFC3P40938 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.06■□□□□ 0.64
RFC3P40938 MKRN4P-201ENST00000444706 1521 ntBASIC19.06■□□□□ 0.64
RFC3P40938 LINC00565-201ENST00000562710 2331 ntBASIC19.06■□□□□ 0.64
RFC3P40938 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.06■□□□□ 0.64
RFC3P40938 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.06■□□□□ 0.64
RFC3P40938 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RFC3P40938 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms