Protein–RNA interactions for Protein: P39904

VPS52, Vacuolar protein sorting-associated protein 52, yeastyeast

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS52P39904 YDR089WYDR089W 2610 nt3.04□□□□□ -1.92
VPS52P39904 SKN7YHR206W 1869 nt3.03□□□□□ -1.92
VPS52P39904 YEL025CYEL025C 3567 nt3.03□□□□□ -1.92
VPS52P39904 PEX6YNL329C 3093 nt3.03□□□□□ -1.92
VPS52P39904 DAD1YDR016C 285 nt3.03□□□□□ -1.92
VPS52P39904 YEL032C-AYEL032C-A 162 nt3.03□□□□□ -1.92
VPS52P39904 PEA2YER149C 1263 nt3.03□□□□□ -1.92
VPS52P39904 RPS7AYOR096W 573 nt3.03□□□□□ -1.92
VPS52P39904 GAL7YBR018C 1101 nt3.03□□□□□ -1.92
VPS52P39904 YDL163WYDL163W 303 nt3.02□□□□□ -1.93
VPS52P39904 tC(GCA)BtC(GCA)B 72 nt3.02□□□□□ -1.93
VPS52P39904 tC(GCA)GtC(GCA)G 72 nt3.02□□□□□ -1.93
VPS52P39904 tC(GCA)P1tC(GCA)P1 72 nt3.02□□□□□ -1.93
VPS52P39904 tC(GCA)P2tC(GCA)P2 72 nt3.02□□□□□ -1.93
VPS52P39904 GRX2YDR513W 432 nt3.02□□□□□ -1.93
VPS52P39904 HLR1YDR528W 1272 nt3.02□□□□□ -1.93
VPS52P39904 YER046W-AYER046W-A 330 nt3.02□□□□□ -1.93
VPS52P39904 SPT2YER161C 1002 nt3.02□□□□□ -1.93
VPS52P39904 SAE2YGL175C 1038 nt3.02□□□□□ -1.93
VPS52P39904 GIC1YHR061C 945 nt3.02□□□□□ -1.93
VPS52P39904 LRP1YHR081W 555 nt3.02□□□□□ -1.93
VPS52P39904 LSM1YJL124C 519 nt3.02□□□□□ -1.93
VPS52P39904 NYV1YLR093C 762 nt3.02□□□□□ -1.93
VPS52P39904 YKE2YLR200W 345 nt3.02□□□□□ -1.93
VPS52P39904 YNL235CYNL235C 432 nt3.02□□□□□ -1.93
VPS52P39904 VAM10YOR068C 345 nt3.02□□□□□ -1.93
VPS52P39904 RCN2YOR220W 798 nt3.02□□□□□ -1.93
VPS52P39904 YPR170CYPR170C 336 nt3.02□□□□□ -1.93
VPS52P39904 PFK26YIL107C 2484 nt3.02□□□□□ -1.93
VPS52P39904 LST4YKL176C 2487 nt3.02□□□□□ -1.93
VPS52P39904 MIT1YEL007W 2001 nt3.02□□□□□ -1.93
VPS52P39904 REC8YPR007C 2043 nt3.02□□□□□ -1.93
VPS52P39904 NOP12YOL041C 1380 nt3.01□□□□□ -1.93
VPS52P39904 YDR149CYDR149C 708 nt3.01□□□□□ -1.93
VPS52P39904 SLX9YGR081C 633 nt3.01□□□□□ -1.93
VPS52P39904 VMA10YHR039C-A 345 nt3.01□□□□□ -1.93
VPS52P39904 COX23YHR116W 456 nt3.01□□□□□ -1.93
VPS52P39904 DLS1YJL065C 504 nt3.01□□□□□ -1.93
VPS52P39904 VMA5YKL080W 1179 nt3.01□□□□□ -1.93
VPS52P39904 GRE2YOL151W 1029 nt3.01□□□□□ -1.93
VPS52P39904 RPC40YPR110C 1008 nt3.01□□□□□ -1.93
VPS52P39904 snR35snR35 204 nt3.01□□□□□ -1.93
VPS52P39904 YSP2YDR326C 4317 nt3.01□□□□□ -1.93
VPS52P39904 POL2YNL262W 6669 nt3□□□□□ -1.93
VPS52P39904 ARG5,6YER069W 2592 nt3□□□□□ -1.93
VPS52P39904 CHA4YLR098C 1947 nt3□□□□□ -1.93
VPS52P39904 RIF1YBR275C 5751 nt3□□□□□ -1.93
VPS52P39904 ARF1YDL192W 546 nt3□□□□□ -1.93
VPS52P39904 FMN1YDR236C 657 nt3□□□□□ -1.93
VPS52P39904 NTF2YER009W 378 nt3□□□□□ -1.93
VPS52P39904 YIL141WYIL141W 390 nt3□□□□□ -1.93
VPS52P39904 RPL17BYJL177W 555 nt3□□□□□ -1.93
VPS52P39904 CPR7YJR032W 1182 nt3□□□□□ -1.93
VPS52P39904 IME1YJR094C 1083 nt3□□□□□ -1.93
VPS52P39904 YLR222C-AYLR222C-A 231 nt3□□□□□ -1.93
VPS52P39904 MBA1YBR185C 837 nt3□□□□□ -1.93
VPS52P39904 snR42snR42 351 nt3□□□□□ -1.93
VPS52P39904 ASI3YNL008C 2031 nt3□□□□□ -1.93
VPS52P39904 YCR108CYCR108C 192 nt2.99□□□□□ -1.93
VPS52P39904 FRQ1YDR373W 573 nt2.99□□□□□ -1.93
VPS52P39904 ATP6Q0085 780 nt2.99□□□□□ -1.93
VPS52P39904 RPS28BYLR264W 204 nt2.99□□□□□ -1.93
VPS52P39904 GOT1YMR292W 417 nt2.99□□□□□ -1.93
VPS52P39904 YOL114CYOL114C 609 nt2.99□□□□□ -1.93
VPS52P39904 GCY1YOR120W 939 nt2.99□□□□□ -1.93
VPS52P39904 VTC4YJL012C 2166 nt2.99□□□□□ -1.93
VPS52P39904 JJJ1YNL227C 1773 nt2.99□□□□□ -1.93
VPS52P39904 SLK19YOR195W 2466 nt2.99□□□□□ -1.93
VPS52P39904 SSE2YBR169C 2082 nt2.99□□□□□ -1.93
VPS52P39904 STU2YLR045C 2667 nt2.98□□□□□ -1.93
VPS52P39904 TOP1YOL006C 2310 nt2.98□□□□□ -1.93
VPS52P39904 YIL082W-AYIL082W-A 4497 nt2.98□□□□□ -1.93
VPS52P39904 DOA4YDR069C 2781 nt2.98□□□□□ -1.93
VPS52P39904 DNM1YLL001W 2274 nt2.98□□□□□ -1.93
VPS52P39904 YCR045W-AYCR045W-A 351 nt2.98□□□□□ -1.93
VPS52P39904 YGR039WYGR039W 312 nt2.98□□□□□ -1.93
VPS52P39904 YHR212CYHR212C 336 nt2.98□□□□□ -1.93
VPS52P39904 YIR040CYIR040C 333 nt2.98□□□□□ -1.93
VPS52P39904 RNH203YLR154C 333 nt2.98□□□□□ -1.93
VPS52P39904 YAR060CYAR060C 336 nt2.98□□□□□ -1.93
VPS52P39904 VPS63YLR261C 327 nt2.98□□□□□ -1.93
VPS52P39904 YLR379WYLR379W 375 nt2.98□□□□□ -1.93
VPS52P39904 YNL089CYNL089C 477 nt2.98□□□□□ -1.93
VPS52P39904 YNL109WYNL109W 546 nt2.98□□□□□ -1.93
VPS52P39904 SEC66YBR171W 621 nt2.98□□□□□ -1.93
VPS52P39904 VPS30YPL120W 1674 nt2.98□□□□□ -1.93
VPS52P39904 YFL019CYFL019C 354 nt2.97□□□□□ -1.93
VPS52P39904 CDC26YFR036W 375 nt2.97□□□□□ -1.93
VPS52P39904 YGR290WYGR290W 444 nt2.97□□□□□ -1.93
VPS52P39904 YAP5YIR018W 738 nt2.97□□□□□ -1.93
VPS52P39904 RPS21AYKR057W 264 nt2.97□□□□□ -1.93
VPS52P39904 SRP68YPL243W 1800 nt2.97□□□□□ -1.93
VPS52P39904 HRD1YOL013C 1656 nt2.97□□□□□ -1.93
VPS52P39904 NSA1YGL111W 1392 nt2.97□□□□□ -1.93
VPS52P39904 AVT5YBL089W 1380 nt2.97□□□□□ -1.93
VPS52P39904 YPS6YIR039C 1614 nt2.97□□□□□ -1.93
VPS52P39904 NEL1YHR035W 1893 nt2.96□□□□□ -1.93
VPS52P39904 POL4YCR014C 1749 nt2.96□□□□□ -1.93
VPS52P39904 SPO14YKR031C 5052 nt2.96□□□□□ -1.94
VPS52P39904 SRD1YCR018C 666 nt2.96□□□□□ -1.94
Retrieved 100 of 7,029 protein–RNA pairs in 77.3 ms