Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC22.02■■□□□ 1.12
MMP8P22894 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
MMP8P22894 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.12
MMP8P22894 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
MMP8P22894 MIR6821-201ENST00000617625 74 ntBASIC22.02■■□□□ 1.12
MMP8P22894 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
MMP8P22894 KRT16P2-201ENST00000414673 1423 ntBASIC22.02■■□□□ 1.12
MMP8P22894 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
MMP8P22894 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
MMP8P22894 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
MMP8P22894 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
MMP8P22894 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
MMP8P22894 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
MMP8P22894 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
MMP8P22894 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
MMP8P22894 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
MMP8P22894 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
MMP8P22894 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
MMP8P22894 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
MMP8P22894 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC22.01■■□□□ 1.11
MMP8P22894 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC22.01■■□□□ 1.11
MMP8P22894 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC22.01■■□□□ 1.11
MMP8P22894 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC22.01■■□□□ 1.11
MMP8P22894 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
MMP8P22894 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
MMP8P22894 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
MMP8P22894 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC22■■□□□ 1.11
MMP8P22894 PLK5-205ENST00000642079 1969 ntBASIC22■■□□□ 1.11
MMP8P22894 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
MMP8P22894 HACD1-201ENST00000326961 773 ntTSL 2 BASIC22■■□□□ 1.11
MMP8P22894 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC22■■□□□ 1.11
MMP8P22894 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC22■■□□□ 1.11
MMP8P22894 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC22■■□□□ 1.11
MMP8P22894 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC22■■□□□ 1.11
MMP8P22894 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
MMP8P22894 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC22■■□□□ 1.11
MMP8P22894 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC22■■□□□ 1.11
MMP8P22894 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC22■■□□□ 1.11
MMP8P22894 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC22■■□□□ 1.11
MMP8P22894 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
MMP8P22894 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
MMP8P22894 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
MMP8P22894 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
MMP8P22894 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
MMP8P22894 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
MMP8P22894 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
MMP8P22894 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
MMP8P22894 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
MMP8P22894 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
MMP8P22894 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.99■■□□□ 1.11
MMP8P22894 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.99■■□□□ 1.11
MMP8P22894 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.99■■□□□ 1.11
MMP8P22894 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
MMP8P22894 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
MMP8P22894 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
MMP8P22894 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
MMP8P22894 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
MMP8P22894 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
MMP8P22894 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.98■■□□□ 1.11
MMP8P22894 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
MMP8P22894 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.98■■□□□ 1.11
MMP8P22894 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
MMP8P22894 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
MMP8P22894 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.98■■□□□ 1.11
MMP8P22894 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
MMP8P22894 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.98■■□□□ 1.11
MMP8P22894 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
MMP8P22894 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
MMP8P22894 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
MMP8P22894 SLC7A5P2-201ENST00000553010 536 ntBASIC21.98■■□□□ 1.11
MMP8P22894 AC087623.3-201ENST00000607047 1098 ntBASIC21.98■■□□□ 1.11
MMP8P22894 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
MMP8P22894 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
MMP8P22894 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.98■■□□□ 1.11
MMP8P22894 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
MMP8P22894 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
MMP8P22894 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
MMP8P22894 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
MMP8P22894 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
MMP8P22894 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
MMP8P22894 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.97■■□□□ 1.11
MMP8P22894 KRT18P20-201ENST00000548986 1279 ntBASIC21.97■■□□□ 1.11
MMP8P22894 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.97■■□□□ 1.11
MMP8P22894 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.97■■□□□ 1.11
MMP8P22894 AC120498.10-201ENST00000621827 505 ntBASIC21.97■■□□□ 1.11
MMP8P22894 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
MMP8P22894 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
MMP8P22894 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.97■■□□□ 1.11
MMP8P22894 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
MMP8P22894 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
MMP8P22894 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
MMP8P22894 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
MMP8P22894 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
MMP8P22894 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
MMP8P22894 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
MMP8P22894 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.96■■□□□ 1.11
MMP8P22894 AC034268.1-201ENST00000441047 882 ntBASIC21.96■■□□□ 1.11
MMP8P22894 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.96■■□□□ 1.11
MMP8P22894 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.96■■□□□ 1.11
MMP8P22894 RARRES2P11-201ENST00000635158 484 ntBASIC21.96■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms