Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
DEFA4P12838 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
DEFA4P12838 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
DEFA4P12838 TUB-203ENST00000534099 1759 ntTSL 2 BASIC16.92■□□□□ 0.3
DEFA4P12838 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
DEFA4P12838 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC16.92■□□□□ 0.3
DEFA4P12838 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
DEFA4P12838 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC16.91■□□□□ 0.3
DEFA4P12838 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DEFA4P12838 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DEFA4P12838 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
DEFA4P12838 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DEFA4P12838 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
DEFA4P12838 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
DEFA4P12838 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
DEFA4P12838 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
DEFA4P12838 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DEFA4P12838 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC16.91■□□□□ 0.3
DEFA4P12838 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC16.91■□□□□ 0.3
DEFA4P12838 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC16.91■□□□□ 0.3
DEFA4P12838 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
DEFA4P12838 AC104564.3-201ENST00000582367 638 ntBASIC16.91■□□□□ 0.3
DEFA4P12838 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC16.91■□□□□ 0.3
DEFA4P12838 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC16.91■□□□□ 0.3
DEFA4P12838 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
DEFA4P12838 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DEFA4P12838 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DEFA4P12838 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DEFA4P12838 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
DEFA4P12838 HCG11-201ENST00000411553 5696 ntBASIC16.91■□□□□ 0.3
DEFA4P12838 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DEFA4P12838 AP004607.7-201ENST00000527152 1677 ntBASIC16.91■□□□□ 0.3
DEFA4P12838 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DEFA4P12838 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
DEFA4P12838 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
DEFA4P12838 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
DEFA4P12838 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
DEFA4P12838 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
DEFA4P12838 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
DEFA4P12838 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
DEFA4P12838 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
DEFA4P12838 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
DEFA4P12838 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC16.9■□□□□ 0.3
DEFA4P12838 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.9■□□□□ 0.3
DEFA4P12838 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC16.9■□□□□ 0.3
DEFA4P12838 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC16.9■□□□□ 0.3
DEFA4P12838 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
DEFA4P12838 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
DEFA4P12838 AC008764.7-201ENST00000593779 1081 ntBASIC16.9■□□□□ 0.3
DEFA4P12838 RNF165-205ENST00000588679 2904 ntBASIC16.9■□□□□ 0.3
DEFA4P12838 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
DEFA4P12838 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
DEFA4P12838 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC16.9■□□□□ 0.3
DEFA4P12838 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
DEFA4P12838 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
DEFA4P12838 LINC01521-201ENST00000504184 1943 ntBASIC16.9■□□□□ 0.3
DEFA4P12838 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
DEFA4P12838 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
DEFA4P12838 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
DEFA4P12838 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
DEFA4P12838 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
DEFA4P12838 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
DEFA4P12838 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC16.89■□□□□ 0.29
DEFA4P12838 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
DEFA4P12838 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
DEFA4P12838 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC16.89■□□□□ 0.29
DEFA4P12838 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
DEFA4P12838 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
DEFA4P12838 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
DEFA4P12838 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
DEFA4P12838 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
DEFA4P12838 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
DEFA4P12838 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
DEFA4P12838 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
DEFA4P12838 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
DEFA4P12838 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
DEFA4P12838 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
DEFA4P12838 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
DEFA4P12838 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC16.88■□□□□ 0.29
DEFA4P12838 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC16.88■□□□□ 0.29
DEFA4P12838 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC16.88■□□□□ 0.29
DEFA4P12838 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC16.88■□□□□ 0.29
DEFA4P12838 AICDA-202ENST00000537228 667 ntTSL 5 BASIC16.88■□□□□ 0.29
DEFA4P12838 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
DEFA4P12838 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
DEFA4P12838 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
DEFA4P12838 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC16.88■□□□□ 0.29
DEFA4P12838 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC16.88■□□□□ 0.29
DEFA4P12838 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
DEFA4P12838 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
DEFA4P12838 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC16.87■□□□□ 0.29
DEFA4P12838 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
DEFA4P12838 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
DEFA4P12838 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
DEFA4P12838 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
DEFA4P12838 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
DEFA4P12838 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
DEFA4P12838 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
DEFA4P12838 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
DEFA4P12838 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms