Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBL4AP11441 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
UBL4AP11441 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBL4AP11441 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBL4AP11441 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
UBL4AP11441 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.29■□□□□ 0.68
UBL4AP11441 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.29■□□□□ 0.68
UBL4AP11441 TERF1P2-201ENST00000583350 1212 ntBASIC19.29■□□□□ 0.68
UBL4AP11441 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.29■□□□□ 0.68
UBL4AP11441 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.29■□□□□ 0.68
UBL4AP11441 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.29■□□□□ 0.68
UBL4AP11441 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBL4AP11441 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
UBL4AP11441 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBL4AP11441 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.28■□□□□ 0.68
UBL4AP11441 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.28■□□□□ 0.68
UBL4AP11441 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.28■□□□□ 0.68
UBL4AP11441 CCDC92B-201ENST00000575506 885 ntBASIC19.28■□□□□ 0.68
UBL4AP11441 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
UBL4AP11441 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.28■□□□□ 0.68
UBL4AP11441 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.28■□□□□ 0.68
UBL4AP11441 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
UBL4AP11441 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
UBL4AP11441 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.28■□□□□ 0.68
UBL4AP11441 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBL4AP11441 FEM1AP4-201ENST00000443167 1987 ntBASIC19.28■□□□□ 0.68
UBL4AP11441 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBL4AP11441 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
UBL4AP11441 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBL4AP11441 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.28■□□□□ 0.68
UBL4AP11441 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
UBL4AP11441 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.27■□□□□ 0.68
UBL4AP11441 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBL4AP11441 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBL4AP11441 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.27■□□□□ 0.68
UBL4AP11441 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
UBL4AP11441 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBL4AP11441 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
UBL4AP11441 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.27■□□□□ 0.68
UBL4AP11441 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
UBL4AP11441 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBL4AP11441 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.27■□□□□ 0.68
UBL4AP11441 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
UBL4AP11441 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
UBL4AP11441 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
UBL4AP11441 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
UBL4AP11441 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.27■□□□□ 0.67
UBL4AP11441 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
UBL4AP11441 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBL4AP11441 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.26■□□□□ 0.67
UBL4AP11441 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
UBL4AP11441 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBL4AP11441 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
UBL4AP11441 KRT18P14-201ENST00000534205 1250 ntBASIC19.26■□□□□ 0.67
UBL4AP11441 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBL4AP11441 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
UBL4AP11441 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBL4AP11441 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.26■□□□□ 0.67
UBL4AP11441 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
UBL4AP11441 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.26■□□□□ 0.67
UBL4AP11441 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBL4AP11441 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.26■□□□□ 0.67
UBL4AP11441 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
UBL4AP11441 AL137060.1-201ENST00000618151 2648 ntBASIC19.25■□□□□ 0.67
UBL4AP11441 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UBL4AP11441 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBL4AP11441 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBL4AP11441 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBL4AP11441 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.25■□□□□ 0.67
UBL4AP11441 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.25■□□□□ 0.67
UBL4AP11441 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.25■□□□□ 0.67
UBL4AP11441 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UBL4AP11441 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBL4AP11441 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
UBL4AP11441 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBL4AP11441 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBL4AP11441 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBL4AP11441 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
UBL4AP11441 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
UBL4AP11441 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
UBL4AP11441 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBL4AP11441 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
UBL4AP11441 AC019069.1-201ENST00000610008 1333 ntBASIC19.25■□□□□ 0.67
UBL4AP11441 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
UBL4AP11441 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBL4AP11441 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBL4AP11441 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBL4AP11441 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBL4AP11441 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.24■□□□□ 0.67
UBL4AP11441 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
UBL4AP11441 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
UBL4AP11441 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.24■□□□□ 0.67
UBL4AP11441 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.24■□□□□ 0.67
UBL4AP11441 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.24■□□□□ 0.67
UBL4AP11441 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
UBL4AP11441 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBL4AP11441 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
UBL4AP11441 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBL4AP11441 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
UBL4AP11441 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms