Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
SNRPA1P09661 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC26.8■■□□□ 1.88
SNRPA1P09661 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
SNRPA1P09661 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
SNRPA1P09661 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
SNRPA1P09661 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC26.8■■□□□ 1.88
SNRPA1P09661 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC26.8■■□□□ 1.88
SNRPA1P09661 LSM12P1-201ENST00000411836 588 ntBASIC26.8■■□□□ 1.88
SNRPA1P09661 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC26.8■■□□□ 1.88
SNRPA1P09661 AL355472.2-201ENST00000422958 438 ntBASIC26.8■■□□□ 1.88
SNRPA1P09661 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC26.8■■□□□ 1.88
SNRPA1P09661 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
SNRPA1P09661 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC26.8■■□□□ 1.88
SNRPA1P09661 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
SNRPA1P09661 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
SNRPA1P09661 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
SNRPA1P09661 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC26.79■■□□□ 1.88
SNRPA1P09661 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
SNRPA1P09661 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC26.79■■□□□ 1.88
SNRPA1P09661 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC26.79■■□□□ 1.88
SNRPA1P09661 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
SNRPA1P09661 KRT17P1-201ENST00000399211 1546 ntBASIC26.79■■□□□ 1.88
SNRPA1P09661 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
SNRPA1P09661 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
SNRPA1P09661 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC26.78■■□□□ 1.88
SNRPA1P09661 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
SNRPA1P09661 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
SNRPA1P09661 SERPINH1P1-201ENST00000419794 1249 ntBASIC26.78■■□□□ 1.88
SNRPA1P09661 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC26.78■■□□□ 1.88
SNRPA1P09661 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC26.78■■□□□ 1.88
SNRPA1P09661 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC26.78■■□□□ 1.88
SNRPA1P09661 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC26.78■■□□□ 1.88
SNRPA1P09661 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC26.78■■□□□ 1.88
SNRPA1P09661 CYP2T3P-201ENST00000601990 817 ntBASIC26.78■■□□□ 1.88
SNRPA1P09661 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
SNRPA1P09661 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
SNRPA1P09661 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
SNRPA1P09661 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC26.77■■□□□ 1.88
SNRPA1P09661 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
SNRPA1P09661 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC26.77■■□□□ 1.88
SNRPA1P09661 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC26.77■■□□□ 1.88
SNRPA1P09661 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
SNRPA1P09661 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
SNRPA1P09661 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.87
SNRPA1P09661 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
SNRPA1P09661 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
SNRPA1P09661 SAPCD2P1-201ENST00000395413 1184 ntBASIC26.76■■□□□ 1.87
SNRPA1P09661 VMO1-204ENST00000441199 741 ntTSL 2 BASIC26.76■■□□□ 1.87
SNRPA1P09661 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC26.76■■□□□ 1.87
SNRPA1P09661 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
SNRPA1P09661 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
SNRPA1P09661 AC008687.6-201ENST00000596318 630 ntBASIC26.76■■□□□ 1.87
SNRPA1P09661 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
SNRPA1P09661 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
SNRPA1P09661 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC26.75■■□□□ 1.87
SNRPA1P09661 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC26.75■■□□□ 1.87
SNRPA1P09661 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
SNRPA1P09661 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
SNRPA1P09661 KRT18P29-201ENST00000397031 1267 ntBASIC26.75■■□□□ 1.87
SNRPA1P09661 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
SNRPA1P09661 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC26.75■■□□□ 1.87
SNRPA1P09661 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC26.75■■□□□ 1.87
SNRPA1P09661 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC26.75■■□□□ 1.87
SNRPA1P09661 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC26.75■■□□□ 1.87
SNRPA1P09661 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC26.75■■□□□ 1.87
SNRPA1P09661 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
SNRPA1P09661 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SNRPA1P09661 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SNRPA1P09661 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC26.74■■□□□ 1.87
SNRPA1P09661 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SNRPA1P09661 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SNRPA1P09661 INO80E-214ENST00000620599 515 ntTSL 2 BASIC26.74■■□□□ 1.87
SNRPA1P09661 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC26.74■■□□□ 1.87
SNRPA1P09661 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
SNRPA1P09661 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SNRPA1P09661 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SNRPA1P09661 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
SNRPA1P09661 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
SNRPA1P09661 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SNRPA1P09661 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SNRPA1P09661 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC26.73■■□□□ 1.87
SNRPA1P09661 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
SNRPA1P09661 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
SNRPA1P09661 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC26.73■■□□□ 1.87
SNRPA1P09661 PRORSD1P-201ENST00000295112 541 ntBASIC26.73■■□□□ 1.87
SNRPA1P09661 GAS7-202ENST00000396115 929 ntTSL 5 BASIC26.73■■□□□ 1.87
SNRPA1P09661 ESRRAP1-201ENST00000400596 1257 ntBASIC26.73■■□□□ 1.87
SNRPA1P09661 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC26.73■■□□□ 1.87
SNRPA1P09661 PTPA-214ENST00000423100 988 ntTSL 2 BASIC26.73■■□□□ 1.87
SNRPA1P09661 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC26.73■■□□□ 1.87
SNRPA1P09661 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC26.73■■□□□ 1.87
SNRPA1P09661 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC26.73■■□□□ 1.87
SNRPA1P09661 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC26.73■■□□□ 1.87
SNRPA1P09661 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
SNRPA1P09661 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SNRPA1P09661 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
SNRPA1P09661 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
SNRPA1P09661 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
SNRPA1P09661 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC26.72■■□□□ 1.87
SNRPA1P09661 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms