Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 NARF-205ENST00000412079 1760 ntTSL 5 BASIC22.9■■□□□ 1.26
CHRNA1P02708 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CHRNA1P02708 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
CHRNA1P02708 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC22.89■■□□□ 1.26
CHRNA1P02708 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC22.89■■□□□ 1.26
CHRNA1P02708 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.89■■□□□ 1.26
CHRNA1P02708 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
CHRNA1P02708 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
CHRNA1P02708 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CHRNA1P02708 GATS-209ENST00000454084 1030 ntTSL 3 BASIC22.89■■□□□ 1.25
CHRNA1P02708 CDV3P1-201ENST00000471403 739 ntBASIC22.89■■□□□ 1.25
CHRNA1P02708 UNC93B5-201ENST00000530315 699 ntBASIC22.89■■□□□ 1.25
CHRNA1P02708 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC22.89■■□□□ 1.25
CHRNA1P02708 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CHRNA1P02708 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC22.89■■□□□ 1.25
CHRNA1P02708 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CHRNA1P02708 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC22.88■■□□□ 1.25
CHRNA1P02708 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CHRNA1P02708 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CHRNA1P02708 AC006058.3-201ENST00000606217 1069 ntBASIC22.88■■□□□ 1.25
CHRNA1P02708 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC22.88■■□□□ 1.25
CHRNA1P02708 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
CHRNA1P02708 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CHRNA1P02708 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.87■■□□□ 1.25
CHRNA1P02708 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC22.87■■□□□ 1.25
CHRNA1P02708 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC22.87■■□□□ 1.25
CHRNA1P02708 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
CHRNA1P02708 VMO1-204ENST00000441199 741 ntTSL 2 BASIC22.87■■□□□ 1.25
CHRNA1P02708 GCSHP5-201ENST00000443090 522 ntBASIC22.87■■□□□ 1.25
CHRNA1P02708 AC128676.1-201ENST00000454392 318 ntBASIC22.87■■□□□ 1.25
CHRNA1P02708 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CHRNA1P02708 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.87■■□□□ 1.25
CHRNA1P02708 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
CHRNA1P02708 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
CHRNA1P02708 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC22.87■■□□□ 1.25
CHRNA1P02708 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC22.87■■□□□ 1.25
CHRNA1P02708 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
CHRNA1P02708 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CHRNA1P02708 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CHRNA1P02708 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC22.86■■□□□ 1.25
CHRNA1P02708 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CHRNA1P02708 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CHRNA1P02708 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC22.86■■□□□ 1.25
CHRNA1P02708 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC22.86■■□□□ 1.25
CHRNA1P02708 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CHRNA1P02708 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CHRNA1P02708 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CHRNA1P02708 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
CHRNA1P02708 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CHRNA1P02708 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC22.85■■□□□ 1.25
CHRNA1P02708 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CHRNA1P02708 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CHRNA1P02708 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CHRNA1P02708 STX5-203ENST00000394690 1568 ntTSL 5 BASIC22.85■■□□□ 1.25
CHRNA1P02708 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CHRNA1P02708 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC22.85■■□□□ 1.25
CHRNA1P02708 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CHRNA1P02708 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CHRNA1P02708 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CHRNA1P02708 NME6-213ENST00000451657 871 ntTSL 2 BASIC22.85■■□□□ 1.25
CHRNA1P02708 AC026366.1-201ENST00000488803 879 ntBASIC22.85■■□□□ 1.25
CHRNA1P02708 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
CHRNA1P02708 IRX5-204ENST00000560154 879 ntTSL 5 BASIC22.85■■□□□ 1.25
CHRNA1P02708 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC22.85■■□□□ 1.25
CHRNA1P02708 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC22.85■■□□□ 1.25
CHRNA1P02708 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CHRNA1P02708 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CHRNA1P02708 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CHRNA1P02708 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CHRNA1P02708 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CHRNA1P02708 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CHRNA1P02708 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
CHRNA1P02708 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CHRNA1P02708 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC22.84■■□□□ 1.25
CHRNA1P02708 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
CHRNA1P02708 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CHRNA1P02708 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC22.84■■□□□ 1.25
CHRNA1P02708 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
CHRNA1P02708 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CHRNA1P02708 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CHRNA1P02708 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CHRNA1P02708 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CHRNA1P02708 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
CHRNA1P02708 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
CHRNA1P02708 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC22.83■■□□□ 1.25
CHRNA1P02708 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CHRNA1P02708 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC22.83■■□□□ 1.25
CHRNA1P02708 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC22.83■■□□□ 1.25
CHRNA1P02708 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CHRNA1P02708 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CHRNA1P02708 MCRIP2P1-201ENST00000394346 511 ntBASIC22.83■■□□□ 1.25
CHRNA1P02708 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
CHRNA1P02708 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
CHRNA1P02708 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC22.83■■□□□ 1.25
CHRNA1P02708 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CHRNA1P02708 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.24
CHRNA1P02708 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.82■■□□□ 1.24
CHRNA1P02708 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CHRNA1P02708 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC22.82■■□□□ 1.24
CHRNA1P02708 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms